RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 RPL29P47914 159 aaKnown RBP11.11□□□□□ -0.63
SCN8A-209ENST00000627620 LRP11Q86VZ4 500 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 DIRC2Q96SL1 478 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 ADAM11O75078 769 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 LEUTXA8MZ59 168 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 AP4M1O00189 453 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 PGA5P0DJD9 388 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 HIST1H1EP10412 219 aaKnown RBP11.11□□□□□ -0.63
SCN8A-209ENST00000627620 ERVFRD-1P60508 538 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 MS4A3Q96HJ5 214 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 PRR33A8MZF0 331 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 GREM1O60565 184 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 ATP6V0CP27449 155 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 FGF12P61328 243 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 ELOBQ15370 118 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 STARD4Q96DR4 205 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 KCNK7Q9Y2U2 307 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 AHRRA9YTQ3 701 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 MGPP08493 103 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 FSTP19883 344 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 PAFAH1B2P68402 229 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 FUT5Q11128 374 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 FAM74A3Q4VXF1 159 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 IGSF11Q5DX21 431 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 MARS2Q96GW9 593 aaKnown RBP11.11□□□□□ -0.63
SCN8A-209ENST00000627620 C7orf77A4D0Y5 90 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 HBZP02008 142 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 MELTFP08582 738 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 STPG2Q8N412 459 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 SNRNP40Q96DI7 357 aaKnown RBP11.1□□□□□ -0.63
SCN8A-209ENST00000627620 P2RX4Q99571 388 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 PARP11Q9NR21 331 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 KIAA1217Q5T5P2 1943 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 SMPD2O60906 423 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 SEC11BP0C7V7 166 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 DHRS11Q6UWP2 260 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 C16orf82Q7Z2V1 217 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 SAP25Q8TEE9 199 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 TMEM191AQ9H0A3 160 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 HIGD1AQ9Y241 93 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 TRAV20A0A0B4J274 112 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 H3BQ15 152 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 RHBDL1O75783 438 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 PRSS53Q2L4Q9 553 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 NCMAPQ5T1S8 102 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 CBLN2Q8IUK8 224 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 LRRC75AQ8NAA5 344 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 MRPL30Q8TCC3 161 aaKnown RBP11.1□□□□□ -0.63
SCN8A-209ENST00000627620 IFT22Q9H7X7 185 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 SPAG17Q6Q759 2223 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 ELOA3CA0A087WX78 387 aaPredicted RBP11.1□□□□□ -0.63
SCN8A-209ENST00000627620 MFSD2BA6NFX1 497 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 LDLRAD3Q86YD5 345 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 RGP1Q92546 391 aaPredicted RBP11.1□□□□□ -0.63
SCN8A-209ENST00000627620 KCNK17Q96T54 332 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 AMELYQ99218 206 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 HILPDAQ9Y5L2 63 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 PITX3O75364 302 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 SLC25A47Q6Q0C1 308 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 OR2D3Q8NGH3 330 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 NINQ8N4C6 2090 aa11.1□□□□□ -0.63
SCN8A-209ENST00000627620 OR2H2O95918 312 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 RNF224P0DH78 156 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 CD1BP29016 333 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 SLC35E4Q6ICL7 350 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 ITLN1Q8WWA0 313 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 ABHD14BQ96IU4 210 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 AURKAIP1Q9NWT8 199 aaPredicted RBP11.09□□□□□ -0.63
SCN8A-209ENST00000627620 PILRBQ9UKJ0 227 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 SF3B6Q9Y3B4 125 aaKnown RBP11.09□□□□□ -0.63
SCN8A-209ENST00000627620 TMSB15BA0A087X1C1 80 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 A0A1W2PP11 408 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 GPX7Q96SL4 187 aaPredicted RBP11.09□□□□□ -0.63
SCN8A-209ENST00000627620 SOSTQ9BQB4 213 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 MRPL37Q9BZE1 423 aaKnown RBP11.09□□□□□ -0.63
SCN8A-209ENST00000627620 MS4A7Q9GZW8 240 aaPredicted RBP11.09□□□□□ -0.63
SCN8A-209ENST00000627620 ALX4Q9H161 411 aaPredicted RBP11.09□□□□□ -0.63
SCN8A-209ENST00000627620 TNFSF18Q9UNG2 199 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 TRBV23-1A0A0A0MS06 115 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 ID1P41134 155 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 MAP1LC3CQ9BXW4 147 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 FUT9Q9Y231 359 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 FCARP24071 287 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 STARD6P59095 220 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 VAX1Q5SQQ9 334 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 SNX22Q96L94 193 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 HS3ST3B1Q9Y662 390 aa11.09□□□□□ -0.63
SCN8A-209ENST00000627620 EPOPA6NHQ4 379 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 PPOXP50336 477 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 LOXL3P58215 753 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF345Q14585 488 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF826PQ6ZT77 177 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 PAXXQ9BUH6 204 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 GAPDHP04406 335 aaKnown RBP11.08□□□□□ -0.64
SCN8A-209ENST00000627620 RCC1P18754 421 aaPredicted RBP11.08□□□□□ -0.64
SCN8A-209ENST00000627620 MPV17P39210 176 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 IER3P46695 156 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 CLEC2AQ6UVW9 174 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 Q6ZN92 141 aa11.08□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF552Q9H707 407 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms