RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SERPINE2P07093 398 aa13.02□□□□□ -0.32
PMS1-221ENST00000624204 SCTP09683 121 aa13.02□□□□□ -0.32
PMS1-221ENST00000624204 MSR1P21757 451 aa13.02□□□□□ -0.32
PMS1-221ENST00000624204 CHRNB4P30926 498 aa13.02□□□□□ -0.32
PMS1-221ENST00000624204 TMEM183BQ1AE95 376 aa13.02□□□□□ -0.32
PMS1-221ENST00000624204 COL5A1-AS1Q5SY13 56 aa13.02□□□□□ -0.32
PMS1-221ENST00000624204 C9orf135Q5VTT2 229 aa13.02□□□□□ -0.32
PMS1-221ENST00000624204 IMMP2LQ96T52 175 aa13.02□□□□□ -0.32
PMS1-221ENST00000624204 RNF150Q9ULK6 438 aa13.02□□□□□ -0.32
PMS1-221ENST00000624204 IGHV3-9P01782 118 aa13.02□□□□□ -0.33
PMS1-221ENST00000624204 NPBWR2P48146 333 aa13.02□□□□□ -0.33
PMS1-221ENST00000624204 DEFB133Q30KQ1 61 aa13.02□□□□□ -0.33
PMS1-221ENST00000624204 HSPB9Q9BQS6 159 aa13.02□□□□□ -0.33
PMS1-221ENST00000624204 OR51B6Q9H340 312 aa13.02□□□□□ -0.33
PMS1-221ENST00000624204 PSENENQ9NZ42 101 aa13.02□□□□□ -0.33
PMS1-221ENST00000624204 MRGPRX1Q96LB2 322 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 TMEM106BQ9NUM4 274 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 RP1L1Q8IWN7 2480 aaPredicted RBP13.01□□□□□ -0.33
PMS1-221ENST00000624204 CAPZBP47756 277 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 YPEL5P62699 121 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 PRR31Q5SQ13 230 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 C9orf50Q5SZB4 431 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 RPP25LQ8N5L8 163 aaKnown RBP13.01□□□□□ -0.33
PMS1-221ENST00000624204 RNASE8Q8TDE3 154 aaKnown RBP13.01□□□□□ -0.33
PMS1-221ENST00000624204 FAM131CQ96AQ9 280 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 SPSB1Q96BD6 273 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 GPR146Q96CH1 333 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 ANAPC16Q96DE5 110 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 ABHD14BQ96IU4 210 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 RASL10BQ96S79 203 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 C20orf202A1L168 122 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 TNFSF13O75888 250 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 IL6RP08887 468 aaPredicted RBP13.01□□□□□ -0.33
PMS1-221ENST00000624204 CDKN1AP38936 164 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 PTTG1IPP53801 180 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 PPP1CBP62140 327 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 EIF3IQ13347 325 aaKnown RBP13.01□□□□□ -0.33
PMS1-221ENST00000624204 CNN3Q15417 329 aaKnown RBP13.01□□□□□ -0.33
PMS1-221ENST00000624204 LMX1AQ8TE12 382 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 HIPK2Q9H2X6 1198 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 METTL7AQ9H8H3 244 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 CACNG5Q9UF02 275 aa13.01□□□□□ -0.33
PMS1-221ENST00000624204 C1QTNF9BB2RNN3 333 aa13□□□□□ -0.33
PMS1-221ENST00000624204 UMODP07911 640 aa13□□□□□ -0.33
PMS1-221ENST00000624204 MMDQ15546 238 aa13□□□□□ -0.33
PMS1-221ENST00000624204 PNPLA5Q7Z6Z6 429 aaPredicted RBP13□□□□□ -0.33
PMS1-221ENST00000624204 ZNF525Q8N782 197 aa13□□□□□ -0.33
PMS1-221ENST00000624204 ZNF709Q8N972 641 aa13□□□□□ -0.33
PMS1-221ENST00000624204 OR10V1Q8NGI7 309 aa13□□□□□ -0.33
PMS1-221ENST00000624204 EXTL1Q92935 676 aa13□□□□□ -0.33
PMS1-221ENST00000624204 CIB3Q96Q77 187 aaPredicted RBP13□□□□□ -0.33
PMS1-221ENST00000624204 OR4C12Q96R67 309 aa13□□□□□ -0.33
PMS1-221ENST00000624204 SAMD10Q9BYL1 202 aa13□□□□□ -0.33
PMS1-221ENST00000624204 TMEM9BQ9NQ34 198 aa13□□□□□ -0.33
PMS1-221ENST00000624204 RYDENQ9NUL5 291 aaKnown RBP13□□□□□ -0.33
PMS1-221ENST00000624204 PTRH2Q9Y3E5 179 aaKnown RBP13□□□□□ -0.33
PMS1-221ENST00000624204 DUXBA0A1W2PPF3 345 aa13□□□□□ -0.33
PMS1-221ENST00000624204 FBLP22087 321 aaKnown RBP13□□□□□ -0.33
PMS1-221ENST00000624204 UCP1P25874 307 aa13□□□□□ -0.33
PMS1-221ENST00000624204 KRTDAPP60985 99 aa13□□□□□ -0.33
PMS1-221ENST00000624204 RSPO1Q2MKA7 263 aaPredicted RBP13□□□□□ -0.33
PMS1-221ENST00000624204 Q6ZWC4 215 aa13□□□□□ -0.33
PMS1-221ENST00000624204 NUFIP2Q7Z417 695 aaKnown RBP13□□□□□ -0.33
PMS1-221ENST00000624204 ATOH7Q8N100 152 aa13□□□□□ -0.33
PMS1-221ENST00000624204 SPTSSAQ969W0 71 aa13□□□□□ -0.33
PMS1-221ENST00000624204 GPR35Q9HC97 309 aa13□□□□□ -0.33
PMS1-221ENST00000624204 SLC22A20A6NK97 555 aa13□□□□□ -0.33
PMS1-221ENST00000624204 PAGE4O60829 102 aa13□□□□□ -0.33
PMS1-221ENST00000624204 IGKV1D-33P01593 117 aa13□□□□□ -0.33
PMS1-221ENST00000624204 IGKV1-33P01594 117 aa13□□□□□ -0.33
PMS1-221ENST00000624204 HBG1P69891 147 aa13□□□□□ -0.33
PMS1-221ENST00000624204 HBG2P69892 147 aa13□□□□□ -0.33
PMS1-221ENST00000624204 ZDHHC23Q8IYP9 409 aa13□□□□□ -0.33
PMS1-221ENST00000624204 ZNF837Q96EG3 531 aaPredicted RBP13□□□□□ -0.33
PMS1-221ENST00000624204 RAB40CQ96S21 281 aa13□□□□□ -0.33
PMS1-221ENST00000624204 ZDHHC11Q9H8X9 412 aa13□□□□□ -0.33
PMS1-221ENST00000624204 ZFP30Q9Y2G7 519 aa13□□□□□ -0.33
PMS1-221ENST00000624204 NRASP01111 189 aa12.99□□□□□ -0.33
PMS1-221ENST00000624204 SERF2P84101 59 aa12.99□□□□□ -0.33
PMS1-221ENST00000624204 SHBQ15464 509 aa12.99□□□□□ -0.33
PMS1-221ENST00000624204 OXGR1Q96P68 337 aa12.99□□□□□ -0.33
PMS1-221ENST00000624204 AGMATQ9BSE5 352 aa12.99□□□□□ -0.33
PMS1-221ENST00000624204 KCNS2Q9ULS6 477 aa12.99□□□□□ -0.33
PMS1-221ENST00000624204 TCRBV21S2A2A0A5A6 115 aa12.99□□□□□ -0.33
PMS1-221ENST00000624204 IGLV3-1P01715 115 aa12.99□□□□□ -0.33
PMS1-221ENST00000624204 SRP14P37108 136 aaKnown RBP12.99□□□□□ -0.33
PMS1-221ENST00000624204 THBS3P49746 956 aa12.99□□□□□ -0.33
PMS1-221ENST00000624204 BTF3L4Q96K17 158 aa12.99□□□□□ -0.33
PMS1-221ENST00000624204 CBY3A6NI87 242 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 CD300LBA8K4G0 201 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 SYNGR2O43760 224 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 PSG2P11465 335 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 TPPP2P59282 170 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 IGFBP7Q16270 282 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 PHYHD1Q5SRE7 291 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 PLCXD3Q63HM9 321 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 Q6ZRM9 215 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 ZNF295-AS1Q8N0V1 137 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 C22orf15Q8WYQ4 148 aa12.98□□□□□ -0.33
PMS1-221ENST00000624204 PINX1Q96BK5 328 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms