RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 OR2S2Q9NQN1 319 aa7.28□□□□□ -1.24
TARDBP-227ENST00000622057 CHCHD3Q9NX63 227 aaKnown RBP7.28□□□□□ -1.24
TARDBP-227ENST00000622057 CKLFQ9UBR5 152 aa7.28□□□□□ -1.24
TARDBP-227ENST00000622057 MRPS28Q9Y2Q9 187 aaKnown RBP7.28□□□□□ -1.24
TARDBP-227ENST00000622057 NBEAL2Q6ZNJ1 2754 aa7.28□□□□□ -1.24
TARDBP-227ENST00000622057 COL7A1Q02388 2944 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 TRAV8-7A0A075B6U6 113 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 TRBV5-5A0A0J9YX44 114 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 PNMA8CA0A1B0GUJ8 204 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 IRGMA1A4Y4 181 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 UBE2QL1A1L167 161 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 G3V318 75 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 WBP4O75554 376 aaKnown RBP7.27□□□□□ -1.25
TARDBP-227ENST00000622057 GPX5O75715 221 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 BAG2O95816 211 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 IGF1P05019 195 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 OR5H8P0DN80 308 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 MYL12AP19105 171 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 PSMB8P28062 276 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 ADARB1P78563 741 aaKnown RBP7.27□□□□□ -1.25
TARDBP-227ENST00000622057 MMDQ15546 238 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 Q499Y3 187 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 MORN2Q502X0 79 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 YIF1BQ5BJH7 314 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 NKAPLQ5M9Q1 402 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 AWAT2Q6E213 333 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 ZNF491Q8N8L2 437 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 RNF152Q8N8N0 203 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 OR1N2Q8NGR9 330 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 MRPS24Q96EL2 167 aaKnown RBP7.27□□□□□ -1.25
TARDBP-227ENST00000622057 TMEM80Q96HE8 168 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 CYYR1Q96J86 154 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 RITA1Q96K30 269 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 ZNF251Q9BRH9 671 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 SELENOIQ9C0D9 397 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 GNB4Q9HAV0 340 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 TAF9BQ9HBM6 251 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 KCNIP1Q9NZI2 227 aa7.27□□□□□ -1.25
TARDBP-227ENST00000622057 RCC2Q9P258 522 aaKnown RBP7.27□□□□□ -1.25
TARDBP-227ENST00000622057 ZNF256Q9Y2P7 627 aaPredicted RBP7.27□□□□□ -1.25
TARDBP-227ENST00000622057 EXOSC1Q9Y3B2 195 aaKnown RBP7.27□□□□□ -1.25
TARDBP-227ENST00000622057 LANCL1O43813 399 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 CRTAPO75718 401 aaPredicted RBP7.26□□□□□ -1.25
TARDBP-227ENST00000622057 CNTFRP26992 372 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 PPIFP30405 207 aaKnown RBP7.26□□□□□ -1.25
TARDBP-227ENST00000622057 CAPGP40121 348 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 ZNF137PP52743 207 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 ACTBP60709 375 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 RPS11P62280 158 aaKnown RBP eCLIP7.26□□□□□ -1.25
TARDBP-227ENST00000622057 LSAMPQ13449 338 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 MED21Q13503 144 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 TMEM30BQ3MIR4 351 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 STEAP3Q658P3 488 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 DMKNQ6E0U4 476 aaPredicted RBP7.26□□□□□ -1.25
TARDBP-227ENST00000622057 TRAT1Q6PIZ9 186 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 PQLC1Q8N2U9 271 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 UBE2E2Q96LR5 201 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 OR14A2Q96R54 314 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 CHCHD6Q9BRQ6 235 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 PARP11Q9NR21 331 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 SMPD3Q9NY59 655 aaPredicted RBP7.26□□□□□ -1.25
TARDBP-227ENST00000622057 DIMT1Q9UNQ2 313 aaKnown RBP7.26□□□□□ -1.25
TARDBP-227ENST00000622057 VSIG4Q9Y279 399 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 SMAD5-AS1Q9Y6J3 95 aa7.26□□□□□ -1.25
TARDBP-227ENST00000622057 IGHV7-81A0A0B4J1V7 117 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 ATP6V0E1O15342 81 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 OR8U8P0C7N1 319 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 MGMTP16455 207 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 FUT3P21217 361 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 PPP1CCP36873 323 aaKnown RBP7.25□□□□□ -1.25
TARDBP-227ENST00000622057 RAB9AP51151 201 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 GNB1P62873 340 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 ZNF616Q08AN1 781 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 FHL3Q13643 280 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 KIAA0141Q14154 515 aaPredicted RBP7.25□□□□□ -1.25
TARDBP-227ENST00000622057 GNMTQ14749 295 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 LIN54Q6MZP7 749 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 GAPTQ8N292 157 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 MRPL30Q8TCC3 161 aaKnown RBP7.25□□□□□ -1.25
TARDBP-227ENST00000622057 CYGBQ8WWM9 190 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 DCUN1D4Q92564 292 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 GGHQ92820 318 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 FAM46BQ96A09 425 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 PGLYRP3Q96LB9 341 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 RDH12Q96NR8 316 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 NABP2Q9BQ15 211 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 ABHD14AQ9BUJ0 271 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 MRPL20Q9BYC9 149 aaKnown RBP7.25□□□□□ -1.25
TARDBP-227ENST00000622057 ANKRD60Q9BZ19 345 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 OR51J1Q9H342 316 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 KIAA1456Q9P272 454 aa7.25□□□□□ -1.25
TARDBP-227ENST00000622057 TRBV5-7A0A0A0MS05 114 aa7.24□□□□□ -1.25
TARDBP-227ENST00000622057 TRAV41A0A0B4J266 112 aa7.24□□□□□ -1.25
TARDBP-227ENST00000622057 FAM90A10PA6NDY2 464 aa7.24□□□□□ -1.25
TARDBP-227ENST00000622057 FAM90A7PA6NKC0 464 aa7.24□□□□□ -1.25
TARDBP-227ENST00000622057 FAM90A23PA8MXZ1 464 aa7.24□□□□□ -1.25
TARDBP-227ENST00000622057 C3orf84H3BNL1 204 aa7.24□□□□□ -1.25
TARDBP-227ENST00000622057 I3L521 148 aa7.24□□□□□ -1.25
TARDBP-227ENST00000622057 OVOL1O14753 267 aa7.24□□□□□ -1.25
TARDBP-227ENST00000622057 NBR2O15453 112 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms