RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 Q8IYB0 196 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 MORN4Q8NDC4 146 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 CLN8Q9UBY8 286 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 ARAP2Q8WZ64 1704 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 A0A0A6YYD5 115 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 AMY1AP04745 511 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 RAE1P78406 368 aaKnown RBP8.68□□□□□ -1.02
COL4A6-210ENST00000621266 FXYD3Q14802 87 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 HIST1H2BAQ96A08 127 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 COL11A2P13942 1736 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-210ENST00000621266 COX7A1P24310 79 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 SRIP30626 198 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 IBA57Q5T440 356 aaKnown RBP8.68□□□□□ -1.02
COL4A6-210ENST00000621266 CADM4Q8NFZ8 388 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 OR10D3Q8NH80 312 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 ZG16BQ96DA0 208 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 GRAMD2BQ96HH9 432 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 MMP25Q9NPA2 562 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 KLF13Q9Y2Y9 288 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-210ENST00000621266 MYO7AQ13402 2215 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 AGFG2O95081 481 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 IGHV4-34P06331 123 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 VSIG10L2P0DP72 767 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 LGALS3P17931 250 aaKnown RBP8.68□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF766Q5HY98 468 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 C1orf53Q5VUE5 145 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 SIPA1L3O60292 1781 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-210ENST00000621266 KIAA1551Q9HCM1 1747 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 RREB1Q92766 1687 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 XIRP1Q702N8 1843 aaKnown RBP8.68□□□□□ -1.02
COL4A6-210ENST00000621266 SPTY2D1-AS1A0A0U1RR47 76 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 ALG1L2C9J202 215 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 TNFSF14O43557 240 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 HLA-DRB1P01911 266 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 ZGLP1P0C6A0 271 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 DMKNQ6E0U4 476 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-210ENST00000621266 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 H1FOOQ8IZA3 346 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-210ENST00000621266 OR13G1Q8NGZ3 307 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 SGK494Q96LW2 274 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 ANAPC13Q9BS18 74 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 FRRS1LQ9P0K9 344 aa8.68□□□□□ -1.02
COL4A6-210ENST00000621266 LYZL6O75951 148 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 PSG2P11465 335 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 HOXA4Q00056 320 aaPredicted RBP8.67□□□□□ -1.02
COL4A6-210ENST00000621266 FAM222BQ8WU58 562 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 NEU1Q99519 415 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 MRPL16Q9NX20 251 aaKnown RBP8.67□□□□□ -1.02
COL4A6-210ENST00000621266 MRM2Q9UI43 246 aaKnown RBP8.67□□□□□ -1.02
COL4A6-210ENST00000621266 PQLC2LA1A4F0 135 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 TYMSP04818 313 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 CKS2P33552 79 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 EIF3IQ13347 325 aaKnown RBP8.67□□□□□ -1.02
COL4A6-210ENST00000621266 ZPBPQ9BS86 351 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 METTL1Q9UBP6 276 aaKnown RBP8.67□□□□□ -1.02
COL4A6-210ENST00000621266 ATAD5Q96QE3 1844 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 RECKO95980 971 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 MSRB3Q8IXL7 192 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 MEGF9Q9H1U4 602 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 ZDHHC8Q9ULC8 765 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 RAXQ9Y2V3 346 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 AUP1Q9Y679 476 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 SHANK3Q9BYB0 1731 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 CELA2BP08218 269 aaPredicted RBP8.67□□□□□ -1.02
COL4A6-210ENST00000621266 GALNSP34059 522 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 PMELP40967 661 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 B4GALNT1Q00973 533 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF124Q15973 351 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 LIMS2Q7Z4I7 341 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 NUDT16L1Q9BRJ7 211 aaKnown RBP8.67□□□□□ -1.02
COL4A6-210ENST00000621266 COA4Q9NYJ1 87 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 IL36RNQ9UBH0 155 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 HDGFL3Q9Y3E1 203 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF735P0CB33 412 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 TM4SF20Q53R12 229 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 BIVMQ86UB2 503 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 TMEM183AQ8IXX5 376 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 OR4S2Q8NH73 311 aa8.67□□□□□ -1.02
COL4A6-210ENST00000621266 CNTRLQ7Z7A1 2325 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 C1QTNF9BB2RNN3 333 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 LMO7DNF2Z398 122 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 RBFOX2O43251 390 aaKnown RBP eCLIP8.66□□□□□ -1.02
COL4A6-210ENST00000621266 FAM53BQ14153 422 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 STPG1Q5TH74 334 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 SFTPA2Q8IWL1 248 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 OR8B12Q8NGG6 310 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 FAM216AQ8WUB2 273 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 LILRA5A6NI73 299 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 C3orf80F5H4A9 247 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 PEX11BO96011 259 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 PPYP01298 95 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 GFRA1P56159 465 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 HERPUD1Q15011 391 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 SLC23A3Q6PIS1 610 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 OR2V1Q8NHB1 315 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 CHRNA10Q9GZZ6 450 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 TMEM189A5PLL7 270 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 EPOPA6NHQ4 379 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 CDC42EP2O14613 210 aa8.66□□□□□ -1.02
COL4A6-210ENST00000621266 NTN1O95631 604 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms