RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 LIN54Q6MZP7 749 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 ZNF562Q6V9R5 426 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 COMMD2Q86X83 199 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 CHAC2Q8WUX2 184 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 PHLDA1Q8WV24 401 aaPredicted RBP3.42□□□□□ -1.86
SNCA-213ENST00000618500 PRRG3Q9BZD7 231 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 PARP11Q9NR21 331 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 KIAA1456Q9P272 454 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 PEF1Q9UBV8 284 aaKnown RBP3.42□□□□□ -1.86
SNCA-213ENST00000618500 FBXL7Q9UJT9 491 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 JPT1Q9UK76 154 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 FBXO7Q9Y3I1 522 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.42□□□□□ -1.86
SNCA-213ENST00000618500 G3V318 75 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 ARPC2O15144 300 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 SYT7O43581 403 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 AMBPP02760 352 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 OSMP13725 252 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 NFYBP25208 207 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 NDPQ00604 133 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 DEFB114Q30KQ6 69 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 ZNF322Q6U7Q0 402 aaPredicted RBP3.42□□□□□ -1.86
SNCA-213ENST00000618500 PPP1R27Q86WC6 154 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 GID4Q8IVV7 300 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 ODF3L1Q8IXM7 274 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 SLC35F2Q8IXU6 374 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 Q8N1X5 172 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 POC5Q8NA72 575 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 C2CD4CQ8TF44 421 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 ASB9Q96DX5 294 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 ATP6V1G3Q96LB4 118 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 MYCBPQ99417 103 aaPredicted RBP3.42□□□□□ -1.86
SNCA-213ENST00000618500 MED20Q9H944 212 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 ADGRL4Q9HBW9 690 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 FAM118AQ9NWS6 357 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 ENOPH1Q9UHY7 261 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 KIF25Q9UIL4 384 aa3.42□□□□□ -1.86
SNCA-213ENST00000618500 A0A0J9YWU9 116 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 A0A1W2PN81 502 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 METTL15A6NJ78 407 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 HMGB1P1B2RPK0 211 aaPredicted RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 YPEL1O60688 119 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 TFAP2AP05549 437 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 C8orf88P0DMB2 117 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 PSMB6P28072 239 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 MC5RP33032 325 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 CHRNA7P36544 502 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ACTBP60709 375 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 PSME3P61289 254 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 MRPL28Q13084 256 aaKnown RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 RIPK1Q13546 671 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ALKBH1Q13686 389 aaKnown RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 MMDQ15546 238 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 PAN3Q58A45 887 aaKnown RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 KCTD20Q7Z5Y7 419 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 PLPPR1Q8TBJ4 325 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 MARC2Q969Z3 335 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 YPEL2Q96QA6 119 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ALG8Q9BVK2 526 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 MRPL18Q9H0U6 180 aaKnown RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 PLEKHA3Q9HB20 300 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 WARS2Q9UGM6 360 aaKnown RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 GSTK1Q9Y2Q3 226 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 MEIKINA0A087WXM9 373 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 TCRBV5S2A0A599 114 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 CCDC22O60826 627 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 CD74P04233 296 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 OR2T7P0C7T2 308 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ZNF44P15621 663 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 NCK1P16333 377 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 FSTP19883 344 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 GNG10P50151 68 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ELLP55199 621 aaPredicted RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 MTCP1P56278 107 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 TPPP2P59282 170 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 IRF3Q14653 427 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ATXN7L3Q14CW9 347 aaPredicted RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 SSX1Q16384 188 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 TM4SF20Q53R12 229 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ZNF691Q5VV52 312 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 NXNL2Q5VZ03 156 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 BVESQ8NE79 360 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ZBTB9Q96C00 473 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 NSMCE2Q96MF7 247 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ZNF251Q9BRH9 671 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 RNF126Q9BV68 326 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 DPCDQ9BVM2 203 aaPredicted RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 KRTAP4-5Q9BYR2 181 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 SPACA1Q9HBV2 294 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 LOC107986453A0A1B0GWG9 222 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 FAM172BPA6NC97 362 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 PRSS29PA6NIE9 313 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 SLC22A1O15245 554 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 GPX5O75715 221 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 DIRAS1O95057 198 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 KRT8P05787 483 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 CRYGBP07316 175 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 ADMP35318 185 aa3.41□□□□□ -1.86
SNCA-213ENST00000618500 CMC4P56277 68 aaPredicted RBP3.41□□□□□ -1.86
SNCA-213ENST00000618500 FAM3BP58499 235 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms