RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CABIN1Q9Y6J0 2220 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 TRAV3A0A0B4J244 114 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 A0A0G2JNJ9 132 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 ATF1P18846 271 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 CLECL1Q8IZS7 167 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 PNKDQ8N490 385 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 ARIH2OSQ8N7S6 290 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 SLC38A9Q8NBW4 561 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 C7orf33Q8WU49 177 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 PHYHIPQ92561 330 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 SEH1LQ96EE3 360 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 RCHY1Q96PM5 261 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 HSPB7Q9UBY9 170 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 Q9UFV3 132 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 A0A1B0GWA3 101 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 NPIPB11E5RHQ5 1161 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 MOSP00540 346 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 SLC25A5P05141 298 aaKnown RBP2.88□□□□□ -1.95
LPP-220ENST00000617246 RPS25P62851 125 aaKnown RBP2.88□□□□□ -1.95
LPP-220ENST00000617246 RAE1P78406 368 aaKnown RBP2.88□□□□□ -1.95
LPP-220ENST00000617246 OR52N4Q8NGI2 321 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 OR10S1Q8NGN2 331 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 DGCR14Q96DF8 476 aaKnown RBP2.88□□□□□ -1.95
LPP-220ENST00000617246 ZNF331Q9NQX6 463 aaPredicted RBP2.88□□□□□ -1.95
LPP-220ENST00000617246 DOK5Q9P104 306 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 KNTC1P50748 2209 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 HEATR5AQ86XA9 2040 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 BANF1O75531 89 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 WT1P19544 449 aaPredicted RBP2.88□□□□□ -1.95
LPP-220ENST00000617246 PRTN3P24158 256 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 TM4SF18Q96CE8 201 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 TMPRSS5Q9H3S3 457 aa2.88□□□□□ -1.95
LPP-220ENST00000617246 SLC25A20O43772 301 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 CD1BP29016 333 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FAM71E1Q6IPT2 247 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 AKR7LQ8NHP1 331 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 RPUSD4Q96CM3 377 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 AUNIPQ9H7T9 357 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 RBMY1BA6NDE4 496 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 RBMY1EA6NEQ0 496 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 C11orf94C9JXX5 98 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 RBMY1DP0C7P1 496 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 RBMY1A1P0DJD3 496 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 RBMY1CP0DJD4 496 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 P0DMU3 169 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FAM231AP0DMU4 169 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FAM231CP0DMU5 169 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 TNK1Q13470 666 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 RNPEPL1Q9HAU8 725 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 IGHV3OR16-10A0A075B7F0 116 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 PSMB1P20618 241 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 RPL18Q07020 188 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 NCMAPQ5T1S8 102 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 TMEM52Q8NDY8 209 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 MACROD1Q9BQ69 325 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FUNDC2Q9BWH2 189 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 LDLRAD4O15165 306 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 NKX2-5P52952 324 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 LGALSLQ3ZCW2 172 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 CCSMST1Q4G0I0 132 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 OR2A1Q8NGT9 310 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 LINC01587Q99440 93 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 SORT1Q99523 831 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 TLNRD1Q9H1K6 362 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 TRAV41A0A0B4J266 112 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 DHRS7CA6NNS2 312 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 SNAPINO95295 136 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 CELA2BP08218 269 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 UCP1P25874 307 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FAM27E3Q08E93 113 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 ZNF146Q15072 292 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 CCDC58Q4VC31 144 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 C6orf52Q5T4I8 152 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 H7C1C5 153 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 CYB5R3P00387 301 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 SH2D6Q7Z4S9 175 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FAM216AQ8WUB2 273 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 GGTLC3B5MD39 225 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 F8W036 122 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FFAR1O14842 300 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 OR9G9P0C7N8 305 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 COX5AP20674 150 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FGF12P61328 243 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 PAX5Q02548 391 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 PPP1R27Q86WC6 154 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 TTC9CQ8N5M4 171 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FRZBQ92765 325 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 MAB21L2Q9Y586 359 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 TMEM238LA0A1B0GVL6 79 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 MFSD2BA6NFX1 497 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 A6NJY4 79 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 INAFM1C9JVW0 142 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 SHBGP04278 402 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 ZNF121P58317 390 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 RPS26P62854 115 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 TMEM42Q69YG0 159 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 RPL7L1Q6DKI1 246 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 KIRREL2Q6UWL6 708 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 KIR3DL3Q8N743 410 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FBXL2Q9UKC9 423 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms