RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 REG1BP48304 166 aa13.41□□□□□ -0.26
CBWD3-211ENST00000615061 HABP2Q14520 560 aaPredicted RBP13.41□□□□□ -0.26
CBWD3-211ENST00000615061 TRAT1Q6PIZ9 186 aa13.41□□□□□ -0.26
CBWD3-211ENST00000615061 LIAT1Q6ZQX7 453 aa13.41□□□□□ -0.26
CBWD3-211ENST00000615061 OR56B1Q8NGI3 324 aa13.41□□□□□ -0.26
CBWD3-211ENST00000615061 SETD6Q8TBK2 473 aa13.41□□□□□ -0.26
CBWD3-211ENST00000615061 RAB18Q9NP72 206 aa13.41□□□□□ -0.26
CBWD3-211ENST00000615061 OR2S2Q9NQN1 319 aa13.41□□□□□ -0.26
CBWD3-211ENST00000615061 KCNIP1Q9NZI2 227 aa13.41□□□□□ -0.26
CBWD3-211ENST00000615061 HSF4Q9ULV5 492 aa13.41□□□□□ -0.26
CBWD3-211ENST00000615061 KCNK7Q9Y2U2 307 aa13.41□□□□□ -0.26
CBWD3-211ENST00000615061 A0A1W2PPI3 338 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 CT45A1Q5HYN5 189 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 Q6ZS46 218 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 ZNF439Q8NDP4 499 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 CT45A3Q8NHU0 189 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 DAPK2Q9UIK4 370 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 PITPNC1Q9UKF7 332 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 TIMM23O14925 209 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 BRS3P32247 399 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 PPP1CCP36873 323 aaKnown RBP13.4□□□□□ -0.26
CBWD3-211ENST00000615061 BLCAPP62952 87 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 HMGN3Q15651 99 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 SFXN4Q6P4A7 337 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 ZNF880Q6PDB4 577 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 SHISA2Q6UWI4 295 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 TPRA1Q86W33 373 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 LINC00311Q8N616 119 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 OR4C13Q8NGP0 309 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 OR56B4Q8NH76 319 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 RBMXL1Q96E39 390 aaKnown RBP13.4□□□□□ -0.26
CBWD3-211ENST00000615061 OCSTAMPQ9BR26 566 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 NPFFR1Q9GZQ6 430 aa13.4□□□□□ -0.26
CBWD3-211ENST00000615061 TRIM64CA6NLI5 447 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 OOSP1A8MZH6 123 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 RAB27BO00194 218 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 HSD17B6O14756 317 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 SNRPBP14678 240 aaKnown RBP13.39□□□□□ -0.27
CBWD3-211ENST00000615061 MNDAP41218 407 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 KIR2DS4P43632 304 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 MORN2Q502X0 79 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 CCDC144NLQ6NUI1 221 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 SLC25A48Q6ZT89 311 aaKnown RBP13.39□□□□□ -0.27
CBWD3-211ENST00000615061 ZNF554Q86TJ5 538 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 DRAM1Q8N682 238 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 CAPSLQ8WWF8 208 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 IL1F10Q8WWZ1 152 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 CFHR4Q92496 578 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 YIPF6Q96EC8 236 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 ZNF702PQ9H963 129 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 VCX3AQ9NNX9 186 aa13.39□□□□□ -0.27
CBWD3-211ENST00000615061 A0A075B6Q4 140 aa13.38□□□□□ -0.27
CBWD3-211ENST00000615061 RAB6AP20340 208 aa13.38□□□□□ -0.27
CBWD3-211ENST00000615061 ARHGDIBP52566 201 aa13.38□□□□□ -0.27
CBWD3-211ENST00000615061 LSM3P62310 102 aaKnown RBP13.38□□□□□ -0.27
CBWD3-211ENST00000615061 HIST2H2BDQ6DRA6 164 aa13.38□□□□□ -0.27
CBWD3-211ENST00000615061 C8orf31Q8N9H6 132 aa13.38□□□□□ -0.27
CBWD3-211ENST00000615061 OR10R2Q8NGX6 335 aa13.38□□□□□ -0.27
CBWD3-211ENST00000615061 RAB3CQ96E17 227 aa13.38□□□□□ -0.27
CBWD3-211ENST00000615061 CMSS1Q9BQ75 279 aaKnown RBP13.38□□□□□ -0.27
CBWD3-211ENST00000615061 RAB9BQ9NP90 201 aa13.38□□□□□ -0.27
CBWD3-211ENST00000615061 IGHV3-72A0A0B4J1Y9 119 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 FAM90A9PA6NNJ1 464 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 SNRNP70P08621 437 aaKnown RBP13.37□□□□□ -0.27
CBWD3-211ENST00000615061 GNB3P16520 340 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 RANBP1P43487 201 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 HTD2P86397 168 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 Q3ZCU0 254 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 LGALS14Q8TCE9 139 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 ST6GALNAC6Q969X2 333 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 GALMQ96C23 342 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 SLC25A33Q9BSK2 321 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 RANBP3Q9H6Z4 567 aaPredicted RBP13.37□□□□□ -0.27
CBWD3-211ENST00000615061 C12orf4Q9NQ89 552 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 JPT1Q9UK76 154 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 TRBV6-6A0A0A6YYG2 114 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 IGHV1-3A0A0C4DH29 117 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 SH2D7A6NKC9 451 aaPredicted RBP13.37□□□□□ -0.27
CBWD3-211ENST00000615061 AIREO43918 545 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 SMIM18P0DKX4 95 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 TMEM30BQ3MIR4 351 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 OR2T6Q8NHC8 308 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 PTX4Q96A99 478 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 ATG5Q9H1Y0 275 aa13.37□□□□□ -0.27
CBWD3-211ENST00000615061 RIMS4Q9H426 269 aaPredicted RBP13.37□□□□□ -0.27
CBWD3-211ENST00000615061 ELF5Q9UKW6 265 aaPredicted RBP13.37□□□□□ -0.27
CBWD3-211ENST00000615061 MFNGO00587 321 aa13.36□□□□□ -0.27
CBWD3-211ENST00000615061 SCTP09683 121 aa13.36□□□□□ -0.27
CBWD3-211ENST00000615061 RAB7AP51149 207 aa13.36□□□□□ -0.27
CBWD3-211ENST00000615061 ZNF816Q0VGE8 651 aaPredicted RBP13.36□□□□□ -0.27
CBWD3-211ENST00000615061 HNF4GQ14541 408 aa13.36□□□□□ -0.27
CBWD3-211ENST00000615061 TMEM95Q3KNT9 176 aa13.36□□□□□ -0.27
CBWD3-211ENST00000615061 MOB1BQ7L9L4 216 aa13.36□□□□□ -0.27
CBWD3-211ENST00000615061 MOB3BQ86TA1 216 aa13.36□□□□□ -0.27
CBWD3-211ENST00000615061 LYG1Q8N1E2 194 aa13.36□□□□□ -0.27
CBWD3-211ENST00000615061 RTN4IP1Q8WWV3 396 aaPredicted RBP13.36□□□□□ -0.27
CBWD3-211ENST00000615061 CITED1Q99966 193 aa13.36□□□□□ -0.27
CBWD3-211ENST00000615061 ABHD14AQ9BUJ0 271 aa13.36□□□□□ -0.27
CBWD3-211ENST00000615061 PARP12Q9H0J9 701 aaKnown RBP13.36□□□□□ -0.27
CBWD3-211ENST00000615061 Q9N2K0 584 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms