RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 F2RP25116 425 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 APLNRP35414 380 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 PPP1CCP36873 323 aaKnown RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 VAMP2P63027 116 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 HLA-DRB3P79483 266 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 CLINT1Q14677 625 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 OR8G1Q15617 311 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 ACSF3Q4G176 576 aaPredicted RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 ZNF324BQ6AW86 544 aaPredicted RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 C20orf204Q6ZNR8 217 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 H1FOOQ8IZA3 346 aaPredicted RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 FAM58AQ8N1B3 248 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 OR2G3Q8NGZ4 309 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 HIST1H2BAQ96A08 127 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 C14orf79Q96F83 325 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 HIPK2Q9H2X6 1198 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 ESRP2Q9H6T0 727 aaKnown RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 ZNF71Q9NQZ8 489 aaPredicted RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 OR2W1Q9Y3N9 320 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 RNF115Q9Y4L5 304 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 RP1L1Q8IWN7 2480 aaPredicted RBP12.46□□□□□ -0.41
CDH1-213ENST00000612417 C7orf77A4D0Y5 90 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 BTBD17A6NE02 478 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 HSPA12AO43301 675 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 TMEM50AO95807 157 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 IL18BPO95998 194 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 MT-ND4LP03901 98 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 S100GP29377 79 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 ASCL1P50553 236 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 RHEBQ15382 184 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 SP5Q6BEB4 398 aaPredicted RBP12.46□□□□□ -0.41
CDH1-213ENST00000612417 FAM180AQ6UWF9 173 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 OR1K1Q8NGR3 316 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 OR5C1Q8NGR4 320 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 ZNF251Q9BRH9 671 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 OR51I2Q9H344 312 aa12.46□□□□□ -0.41
CDH1-213ENST00000612417 J3QW42 95 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 DEGS1O15121 323 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 LILRA1O75019 489 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 RAB5BP61020 215 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 HABP2Q14520 560 aaPredicted RBP12.46□□□□□ -0.42
CDH1-213ENST00000612417 OR1J1Q8NGS3 322 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 OR10J5Q8NHC4 309 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 GNPNAT1Q96EK6 184 aaPredicted RBP12.46□□□□□ -0.42
CDH1-213ENST00000612417 GPHA2Q96T91 129 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 MAGT1Q9H0U3 335 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 KCNJ16Q9NPI9 418 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 TREM2Q9NZC2 230 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 TAAR3PQ9P1P4 343 aa12.46□□□□□ -0.42
CDH1-213ENST00000612417 DSPP15924 2871 aaKnown RBP12.45□□□□□ -0.42
CDH1-213ENST00000612417 J3QT63 122 aa12.45□□□□□ -0.42
CDH1-213ENST00000612417 SMIM6P0DI80 62 aa12.45□□□□□ -0.42
CDH1-213ENST00000612417 ZNF44P15621 663 aa12.45□□□□□ -0.42
CDH1-213ENST00000612417 PTAFRP25105 342 aa12.45□□□□□ -0.42
CDH1-213ENST00000612417 TGFBR3Q03167 851 aa12.45□□□□□ -0.42
CDH1-213ENST00000612417 NANOS1Q8WY41 292 aaKnown RBP12.45□□□□□ -0.42
CDH1-213ENST00000612417 BCL2L2Q92843 193 aaPredicted RBP12.45□□□□□ -0.42
CDH1-213ENST00000612417 TMEM68Q96MH6 324 aa12.45□□□□□ -0.42
CDH1-213ENST00000612417 ZNF488Q96MN9 340 aa12.45□□□□□ -0.42
CDH1-213ENST00000612417 RAXQ9Y2V3 346 aa12.45□□□□□ -0.42
CDH1-213ENST00000612417 IGF2RP11717 2491 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 A0A1B0GU03 582 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 LRP5LA4QPB2 252 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 OMGP23515 440 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 MDH2P40926 338 aaKnown RBP12.44□□□□□ -0.42
CDH1-213ENST00000612417 KIR2DL2P43627 348 aaPredicted RBP12.44□□□□□ -0.42
CDH1-213ENST00000612417 DYNLT3P51808 116 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 TMPRSS3P57727 454 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 VWA1Q6PCB0 445 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 SPSB3Q6PJ21 355 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 MOB1BQ7L9L4 216 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 SVIPQ8NHG7 77 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 FBXO7Q9Y3I1 522 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 HS3ST1O14792 307 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 CHST1O43916 411 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 LYZL6O75951 148 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 SNRNP70P08621 437 aaKnown RBP12.44□□□□□ -0.42
CDH1-213ENST00000612417 S100PP25815 95 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 AKR1C3P42330 323 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 PAX9P55771 341 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 FOXF2Q12947 444 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 Q6P435 159 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 SFT2D1Q8WV19 159 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 RDH5Q92781 318 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 GSN-AS1Q9NRJ2 163 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 KIAA1456Q9P272 454 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 DKK4Q9UBT3 224 aa12.44□□□□□ -0.42
CDH1-213ENST00000612417 ZGRF1Q86YA3 2104 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 C1orf196B1AJZ1 125 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.43□□□□□ -0.42
CDH1-213ENST00000612417 M0R036 132 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 IGHV1-2P23083 117 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 BPIFB3P59826 476 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 GUSBP1Q15486 140 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 AKIRIN2Q53H80 203 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 KRTCAP3Q53RY4 240 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 DPPA3Q6W0C5 159 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 C17orf78Q8N4C9 275 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 C2CD4CQ8TF44 421 aa12.43□□□□□ -0.42
CDH1-213ENST00000612417 ATP5SQ99766 215 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms