RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 LINC01006Q8NI28 216 aa11.49□□□□□ -0.57
HDDC2-209ENST00000609477 TOMM40LQ969M1 308 aa11.49□□□□□ -0.57
HDDC2-209ENST00000609477 RAB3CQ96E17 227 aa11.49□□□□□ -0.57
HDDC2-209ENST00000609477 PECRQ9BY49 303 aa11.49□□□□□ -0.57
HDDC2-209ENST00000609477 C12orf4Q9NQ89 552 aa11.49□□□□□ -0.57
HDDC2-209ENST00000609477 OR2S2Q9NQN1 319 aa11.49□□□□□ -0.57
HDDC2-209ENST00000609477 RNF114Q9Y508 228 aa11.49□□□□□ -0.57
HDDC2-209ENST00000609477 LOC100506127A0A0U1RQW1 187 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 SERPINE3A8MV23 424 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 TXNL1O43396 289 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 YPEL1O60688 119 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 GAPDHP04406 335 aaKnown RBP11.48□□□□□ -0.57
HDDC2-209ENST00000609477 FAM106CPP0CH98 169 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 PAX6P26367 422 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 RAB13P51153 203 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 ZNF137PP52743 207 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 MRPS15P82914 257 aaKnown RBP11.48□□□□□ -0.57
HDDC2-209ENST00000609477 MORN2Q502X0 79 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 PLA1AQ53H76 456 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 PRR18Q8N4B5 295 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 LEAP2Q969E1 77 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 YIPF6Q96EC8 236 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 ARHGAP5-AS1Q96IT6 56 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 YPEL2Q96QA6 119 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 GHITMQ9H3K2 345 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 CHMP1AQ9HD42 196 aaPredicted RBP11.48□□□□□ -0.57
HDDC2-209ENST00000609477 AK3Q9UIJ7 227 aa11.48□□□□□ -0.57
HDDC2-209ENST00000609477 FAM90A9PA6NNJ1 464 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 M0QZK8 103 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 HAX1O00165 279 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 RAB27BO00194 218 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 AIREO43918 545 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 GNG10P50151 68 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 HABP2Q14520 560 aaPredicted RBP11.47□□□□□ -0.57
HDDC2-209ENST00000609477 PLAC9Q5JTB6 97 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 UTF1Q5T230 341 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 CCBE1Q6UXH8 406 aaPredicted RBP11.47□□□□□ -0.57
HDDC2-209ENST00000609477 ZNF439Q8NDP4 499 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 OR1L1Q8NH94 360 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 OR2T6Q8NHC8 308 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 SGMS2Q8NHU3 365 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 CMSS1Q9BQ75 279 aaKnown RBP11.47□□□□□ -0.57
HDDC2-209ENST00000609477 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.47□□□□□ -0.57
HDDC2-209ENST00000609477 DAPK2Q9UIK4 370 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 ETV7Q9Y603 341 aa11.47□□□□□ -0.57
HDDC2-209ENST00000609477 ITGB1BP1O14713 200 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 HSD17B6O14756 317 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 CHST1O43916 411 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 OR2F2O95006 317 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 DIRAS3O95661 229 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 IGHV3-7P01780 117 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 CD3GP09693 182 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 SLC2A2P11168 524 aaPredicted RBP11.46□□□□□ -0.57
HDDC2-209ENST00000609477 PROK1P58294 105 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 SRSF7Q16629 238 aaKnown RBP eCLIP11.46□□□□□ -0.57
HDDC2-209ENST00000609477 Q8N2B8 174 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 CAPSLQ8WWF8 208 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 WFDC12Q8WWY7 111 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 ST6GALNAC6Q969X2 333 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 RBM14Q96PK6 669 aaKnown RBP11.46□□□□□ -0.57
HDDC2-209ENST00000609477 PRSS22Q9GZN4 317 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 Q9N2K0 584 aa11.46□□□□□ -0.57
HDDC2-209ENST00000609477 A0A0A6YYH2 397 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 IGHV3-43A0A0B4J1X8 118 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 A0A1W2PPI3 338 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 A6NJ64 397 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 MFNGO00587 321 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 IGHV3-43DP0DP04 118 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 HIST1H1DP16402 221 aaKnown RBP11.45□□□□□ -0.58
HDDC2-209ENST00000609477 ZBTB25P24278 435 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 ZNF134P52741 427 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 EFNB2P52799 333 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 MXD1Q05195 221 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 CT45A1Q5HYN5 189 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 CT45A3Q8NHU0 189 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 UBALD1Q8TB05 177 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 CFHR4Q92496 578 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 ATG5Q9H1Y0 275 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 KCNK7Q9Y2U2 307 aa11.45□□□□□ -0.58
HDDC2-209ENST00000609477 IGHV1-3A0A0C4DH29 117 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 A0A1W2PPE3 182 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 TRDCB7Z8K6 153 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 TIMM23O14925 209 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 LANCL1O43813 399 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 CD1BP29016 333 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 SERPINB10P48595 397 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 HLA-DRB3P79483 266 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 PITPNAQ00169 270 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 PLA2G7Q13093 441 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 EBI3Q14213 229 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 KIR2DS1Q14954 304 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 MOGAT2Q3SYC2 334 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 FAM71F2Q6NXP2 309 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 TMEM219Q86XT9 240 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 OR2AK2Q8NG84 335 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 OR13F1Q8NGS4 319 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 SETD6Q8TBK2 473 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 RTN4IP1Q8WWV3 396 aaPredicted RBP11.44□□□□□ -0.58
HDDC2-209ENST00000609477 IL1F10Q8WWZ1 152 aa11.44□□□□□ -0.58
HDDC2-209ENST00000609477 EDARADDQ8WWZ3 215 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms