RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 HLA-DRB3P79483 266 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 KIR2DS1Q14954 304 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 SPCS2Q15005 226 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 SLC9A3R2Q15599 337 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 SSX2Q16385 188 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
CTSA-219ENST00000607841 ZNF260Q3ZCT1 412 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 OR10X1Q8NGY0 326 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 OR5R1Q8NH85 324 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 C17orf50Q8WW18 174 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 IL1F10Q8WWZ1 152 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 TMEM158Q8WZ71 300 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 LEAP2Q969E1 77 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 ISOC1Q96CN7 298 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 ESM1Q9NQ30 184 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 CEPT1Q9Y6K0 416 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 CUBNO60494 3623 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 IGHV3-43A0A0B4J1X8 118 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 SMIM31A0A1B0GVY4 71 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 OOSP1A8MZH6 123 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 TRDCB7Z8K6 153 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 XRCC3O43542 346 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 IGHV3-7P01780 117 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 APOA1P02647 267 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 RNASE1P07998 156 aaKnown RBP11.55□□□□□ -0.56
CTSA-219ENST00000607841 FCGR3AP08637 254 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 IGHV3-43DP0DP04 118 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 DTYMKP23919 212 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 IL3RAP26951 378 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 MADCAM1Q13477 382 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 LRRC75BQ2VPJ9 315 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 CCDC144NLQ6NUI1 221 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 LINC00311Q8N616 119 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 AJUBAQ96IF1 538 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 SSX3Q99909 188 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 OCSTAMPQ9BR26 566 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 ABCB10Q9NRK6 738 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 HILPDAQ9Y5L2 63 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 MXRA5Q9NR99 2828 aa11.55□□□□□ -0.56
CTSA-219ENST00000607841 TMEM235A6NFC5 223 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 VGLL3A8MV65 326 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 H3BMQ9 156 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 YPEL1O60688 119 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 IGHV4-59P01825 116 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 ZBTB25P24278 435 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 MORN2Q502X0 79 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 LY6G6FQ5SQ64 297 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 TMEM69Q5SWH9 247 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 TPTE2P1Q5T6R2 138 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 C16orf87Q6PH81 154 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 Q6ZPA2 131 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 OR52L2PQ8NGH6 319 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 OR10V1Q8NGI7 309 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 OR4A4PQ8NGN8 299 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 RPEQ96AT9 228 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 DUX5Q96PT3 197 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 YPEL2Q96QA6 119 aa11.54□□□□□ -0.56
CTSA-219ENST00000607841 LY6LH3BQJ8 138 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 H3BUX3 64 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 FABP7O15540 132 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 HSPA12AO43301 675 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 LPLP06858 475 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 SCTP09683 121 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 BRS3P32247 399 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 DYNLT3P51808 116 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 SRSF2Q01130 221 aaKnown RBP11.53□□□□□ -0.56
CTSA-219ENST00000607841 LDLRAD2Q5SZI1 272 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 UTF1Q5T230 341 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 Q6ZS49 121 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
CTSA-219ENST00000607841 OR2AK2Q8NG84 335 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 DYNC2LI1Q8TCX1 351 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 AUNIPQ9H7T9 357 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 TNFRSF19Q9NS68 423 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 CCDC59Q9P031 241 aaKnown RBP11.53□□□□□ -0.56
CTSA-219ENST00000607841 RSL24D1Q9UHA3 163 aaKnown RBP11.53□□□□□ -0.56
CTSA-219ENST00000607841 ELF5Q9UKW6 265 aaPredicted RBP11.53□□□□□ -0.56
CTSA-219ENST00000607841 DSCAML1Q8TD84 2053 aa11.53□□□□□ -0.56
CTSA-219ENST00000607841 A0A1W2PPE3 182 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 FAM25AB3EWG3 89 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 FAM25CB3EWG5 89 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 FAM25GB3EWG6 89 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 ZNF701M0R085 212 aaPredicted RBP11.52□□□□□ -0.57
CTSA-219ENST00000607841 HPGDSO60760 199 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 DIRAS3O95661 229 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 CRYBA1P05813 215 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 PPP1CCP36873 323 aaKnown RBP11.52□□□□□ -0.57
CTSA-219ENST00000607841 CBX5P45973 191 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 RAB7AP51149 207 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 RPL15P61313 204 aaKnown RBP11.52□□□□□ -0.57
CTSA-219ENST00000607841 PLA1AQ53H76 456 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 CT45A1Q5HYN5 189 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 C5orf24Q7Z6I8 188 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 IZUMO1Q8IYV9 350 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 DYNAPQ8N1N2 210 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 ZNF439Q8NDP4 499 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 CT45A3Q8NHU0 189 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 NUDCD2Q8WVJ2 157 aa11.52□□□□□ -0.57
CTSA-219ENST00000607841 EDARADDQ8WWZ3 215 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms