RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 ZNF645Q8N7E2 425 aa10.21□□□□□ -0.77
NEDD8-MDP1-203ENST00000604306 OR2T35Q8NGX2 323 aa10.21□□□□□ -0.77
NEDD8-MDP1-203ENST00000604306 MRGPRDQ8TDS7 321 aa10.21□□□□□ -0.77
NEDD8-MDP1-203ENST00000604306 IL1F10Q8WWZ1 152 aa10.21□□□□□ -0.77
NEDD8-MDP1-203ENST00000604306 ARL11Q969Q4 196 aa10.21□□□□□ -0.77
NEDD8-MDP1-203ENST00000604306 YPEL2Q96QA6 119 aa10.21□□□□□ -0.77
NEDD8-MDP1-203ENST00000604306 NMES1Q9C002 83 aa10.21□□□□□ -0.77
NEDD8-MDP1-203ENST00000604306 GAL3ST2Q9H3Q3 398 aa10.21□□□□□ -0.77
NEDD8-MDP1-203ENST00000604306 SLC25A10Q9UBX3 287 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-MDP1-203ENST00000604306 GAB2Q9UQC2 676 aa10.21□□□□□ -0.77
NEDD8-MDP1-203ENST00000604306 IGKV1D-13A0A0B4J2D9 117 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 KBTBD11-OT1A0A1B0GTJ5 212 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 H0Y980 276 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TMPRSS2O15393 492 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 NDUFB3O43676 98 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 IGKV1-13P0DP09 117 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 PI3P19957 117 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 DNASE1P24855 282 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 CEACAM6P40199 344 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 EDDM3AQ14507 147 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TMEM187Q14656 261 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 FAM201AQ5SY85 155 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 GSG1LQ6UXU4 331 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 LIAT1Q6ZQX7 453 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 ZNF818PQ6ZRF7 136 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 LGI3Q8N145 548 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 OR1L1Q8NH94 360 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 CASTOR1Q8WTX7 329 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 SECTM1Q8WVN6 248 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TIMD4Q96H15 378 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TMEM56Q96MV1 263 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 CCL13Q99616 98 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TMEM222Q9H0R3 208 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 CALYQ9NYX4 217 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 OR1A1Q9P1Q5 309 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 CLN8Q9UBY8 286 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TMEM56-RWDD3S4R434 201 aa10.2□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 C3orf85A0A1B0GTC6 90 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 HMSDA8MTL9 139 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 IFNA21P01568 189 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 SOD3P08294 240 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 F2RP25116 425 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 UCP1P25874 307 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 SSTR5P35346 364 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 RAB7AP51149 207 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 EDDM3BP56851 147 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TMEM33P57088 247 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 HOXA4Q00056 320 aaPredicted RBP10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 ANKRD55Q3KP44 614 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TGIF2LYQ8IUE0 185 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 FAM216BQ8N7L0 139 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 RAB1CQ92928 201 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 RAB39BQ96DA2 213 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 MSI2Q96DH6 328 aaKnown RBP10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 DMRTB1Q96MA1 342 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TMEM246Q9BRR3 403 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 CHODLQ9H9P2 273 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 OR2S2Q9NQN1 319 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 LIN7CQ9NUP9 197 aaKnown RBP10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 DCAF16Q9NXF7 216 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TMED3Q9Y3Q3 217 aa10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 YLPM1P49750 1951 aaKnown RBP10.19□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 G3V3Q6 166 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 ADAM20O43506 726 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 PGLYRP1O75594 196 aaPredicted RBP10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 CDS2O95674 445 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 RBP4P02753 201 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 PRB1P04280 392 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 OR5AC1P0C628 307 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 PET100P0DJ07 73 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 RPA2P15927 270 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 C4BPBP20851 252 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 LOXL3P58215 753 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 SLC9A3R2Q15599 337 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 C2orf68Q2NKX9 166 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 PHLDA2Q53GA4 152 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TBC1D26Q86UD7 250 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 PRR18Q8N4B5 295 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 C8orf31Q8N9H6 132 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 UXS1Q8NBZ7 420 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 DEFB108BQ8NET1 73 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 GLYATL2Q8WU03 294 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 IGFBPL1Q8WX77 278 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 C18orf12Q96KH6 178 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 CCL28Q9NRJ3 127 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 ZFP57Q9NU63 452 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 COMMD9Q9P000 198 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 MIOXQ9UGB7 285 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 USF3Q68DE3 2245 aa10.18□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TRAV39A0A0B4J263 110 aa10.17□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 A0A1W2PPR1 153 aa10.17□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 CLEC18AA5D8T8 446 aa10.17□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 OVOL3O00110 214 aa10.17□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 ZNF205O95201 554 aa10.17□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 F12P00748 615 aaPredicted RBP10.17□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 TFF1P04155 84 aa10.17□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 SLC25A4P12235 298 aa10.17□□□□□ -0.78
NEDD8-MDP1-203ENST00000604306 SLC25A6P12236 298 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms