RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 TRIOO75962 3097 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 AHCTF1Q8WYP5 2266 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 PGA4P0DJD7 388 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 PSG1P11464 419 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 LPAL2Q16609 132 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 SDK2Q58EX2 2172 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 NIT1Q86X76 327 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 TMEM217Q8N7C4 229 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 C10orf35Q96D05 121 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 FOXB1Q99853 325 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 ANGPTL4Q9BY76 406 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 TMEM14DPA8MWL7 114 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 CTSDP07339 412 aaPredicted RBP9.05□□□□□ -0.96
LIG1-220ENST00000601091 SFTA3P0C7M3 94 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 FUT3P21217 361 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 UBE2NP61088 152 aaKnown RBP9.05□□□□□ -0.96
LIG1-220ENST00000601091 CCDC144NLQ6NUI1 221 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 SLC30A7Q8NEW0 376 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 OR4P4Q8NGL7 312 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 ORAOV1Q8WV07 137 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 KIRREL1Q96J84 757 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 ZNF391Q9UJN7 358 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 ZNF816-ZNF321PA0A0X1KG74 233 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 IL6RP08887 468 aaPredicted RBP9.05□□□□□ -0.96
LIG1-220ENST00000601091 OR13C7P0DN81 318 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 SLC25A47Q6Q0C1 308 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 C20orf196Q8IYI0 205 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 RNF122Q9H9V4 155 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 FBXL17Q9UF56 701 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 SLC45A2Q9UMX9 530 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 IGKV1D-43A0A0B4J1Z2 117 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 HBE1P02100 147 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 SOD3P08294 240 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 GABRA4P48169 554 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 UNC119Q13432 240 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 JOSD1Q15040 202 aaPredicted RBP9.04□□□□□ -0.96
LIG1-220ENST00000601091 Q6ZVH6 145 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 LOXL4Q96JB6 756 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 ZNF32P17041 273 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 DVL1P1P54792 670 aaPredicted RBP9.04□□□□□ -0.96
LIG1-220ENST00000601091 APCDD1LQ8NCL9 501 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 MRPL13Q9BYD1 178 aaKnown RBP9.04□□□□□ -0.96
LIG1-220ENST00000601091 CDH20Q9HBT6 801 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 LOC101059948A0A1B0GTJ6 334 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 UMAD1C9J7I0 102 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 RRADP55042 308 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 MSI2Q96DH6 328 aaKnown RBP9.04□□□□□ -0.96
LIG1-220ENST00000601091 NAA60Q9H7X0 242 aa9.04□□□□□ -0.96
LIG1-220ENST00000601091 CACNA1DQ01668 2161 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 LOC105371242A0A075B767 164 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 TRAV14DV4A0A0A6YYC5 116 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 TRAF3IP2O43734 574 aaPredicted RBP9.03□□□□□ -0.96
LIG1-220ENST00000601091 OR2C1O95371 312 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 CLDN15P56746 228 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 PDCD1Q15116 288 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 OR2I1PQ8NGU4 316 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 SEC11CQ9BY50 192 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 IGHV5-10-1A0A0J9YXX1 117 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 B5MCH6 92 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 OR5AC1P0C628 307 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 GZMBP10144 247 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 HNRNPA3P51991 378 aaKnown RBP9.03□□□□□ -0.96
LIG1-220ENST00000601091 RAB1AP62820 205 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 RPL32P62910 135 aaKnown RBP9.03□□□□□ -0.96
LIG1-220ENST00000601091 LY6G6FQ5SQ64 297 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 RNASEKQ6P5S7 137 aaKnown RBP9.03□□□□□ -0.96
LIG1-220ENST00000601091 C5orf24Q7Z6I8 188 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 TMEM116Q8NCL8 245 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 OR1K1Q8NGR3 316 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 LYPD6BQ8NI32 183 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 SNX22Q96L94 193 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 SRSF8Q9BRL6 282 aaKnown RBP9.03□□□□□ -0.96
LIG1-220ENST00000601091 TMED3Q9Y3Q3 217 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 HAND1O96004 215 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 PATE4P0C8F1 98 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 TCL1AP56279 114 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 BSXQ3C1V8 233 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 MIDNQ504T8 468 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 AADACL3Q5VUY0 350 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 UNQ5815/PRO19632Q6UWF5 114 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 OR13G1Q8NGZ3 307 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 M1APQ8TC57 530 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 C5orf66Q9H5L9 145 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 OCIAD1Q9NX40 245 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 RFNGQ9Y644 331 aa9.03□□□□□ -0.96
LIG1-220ENST00000601091 LRRK1Q38SD2 2015 aa9.02□□□□□ -0.96
LIG1-220ENST00000601091 PDCD6O75340 191 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 HPRT1P00492 218 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 CLPSP04118 112 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 HPNP05981 417 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 TGFBR3Q03167 851 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 PDLIM3Q53GG5 364 aaPredicted RBP9.02□□□□□ -0.97
LIG1-220ENST00000601091 WIPI1Q5MNZ9 446 aaPredicted RBP9.02□□□□□ -0.97
LIG1-220ENST00000601091 OR10X1Q8NGY0 326 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 GNPNAT1Q96EK6 184 aaPredicted RBP9.02□□□□□ -0.97
LIG1-220ENST00000601091 NIPSNAP3BQ9BS92 247 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 OR5AC2Q9NZP5 309 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 TRAPPC2LQ9UL33 140 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 PAM16Q9Y3D7 125 aa9.02□□□□□ -0.97
LIG1-220ENST00000601091 OBSL1O75147 1896 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms