RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TMEM219Q86XT9 240 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 DTX3Q8N9I9 347 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 OR4C13Q8NGP0 309 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 OR4K15Q8NH41 348 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 OR1L1Q8NH94 360 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 NDNFQ8TB73 568 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 CCDC107Q8WV48 283 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 RBM14Q96PK6 669 aaKnown RBP7.01□□□□□ -1.29
SSBP4-208ENST00000600628 YPEL2Q96QA6 119 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 AGMATQ9BSE5 352 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 FAAP24Q9BTP7 215 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 NPFFR1Q9GZQ6 430 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 OR51E2Q9H255 320 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 RIMS4Q9H426 269 aaPredicted RBP7.01□□□□□ -1.29
SSBP4-208ENST00000600628 PLGRKTQ9HBL7 147 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 TAF9BQ9HBM6 251 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.01□□□□□ -1.29
SSBP4-208ENST00000600628 ABCB10Q9NRK6 738 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 RAB22AQ9UL26 194 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 SIGLEC9Q9Y336 463 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 AMMECR1Q9Y4X0 333 aaPredicted RBP7.01□□□□□ -1.29
SSBP4-208ENST00000600628 TET2Q6N021 2002 aaPredicted RBP7.01□□□□□ -1.29
SSBP4-208ENST00000600628 NOTCH3Q9UM47 2321 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 PLXNB1O43157 2135 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 IGHV1-3A0A0C4DH29 117 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 NOTOA8MTQ0 251 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 MFNGO00587 321 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 TOR1AO14656 332 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 PDCD5O14737 125 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 SPINT2O43291 252 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 DIRAS3O95661 229 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 RAB3BP20337 219 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 PSMB9P28065 219 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 BRS3P32247 399 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 SRSF7Q16629 238 aaKnown RBP eCLIP7□□□□□ -1.29
SSBP4-208ENST00000600628 MOGAT2Q3SYC2 334 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 Q6ZS49 121 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 MOB1BQ7L9L4 216 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 IZUMO1Q8IYV9 350 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 OR2T6Q8NHC8 308 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 UBALD1Q8TB05 177 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 NEK7Q8TDX7 302 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 RTN4IP1Q8WWV3 396 aaPredicted RBP7□□□□□ -1.29
SSBP4-208ENST00000600628 YIPF6Q96EC8 236 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 ARHGAP5-AS1Q96IT6 56 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 NEDD4LQ96PU5 975 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 ZNF251Q9BRH9 671 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 URM1Q9BTM9 101 aaKnown RBP7□□□□□ -1.29
SSBP4-208ENST00000600628 PECRQ9BY49 303 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 RAB9BQ9NP90 201 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 PLSCR3Q9NRY6 295 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 AK3Q9UIJ7 227 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 JPT1Q9UK76 154 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 TRAPPC2LQ9UL33 140 aa7□□□□□ -1.29
SSBP4-208ENST00000600628 IGHV3-43A0A0B4J1X8 118 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 A0A0B4J203 849 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 IGKV1-6A0A0C4DH72 117 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 A0A1W2PPE3 182 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 ADARB2-AS1A8MUL3 147 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 M0QZ24 198 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 SDCBPO00560 298 aaPredicted RBP6.99□□□□□ -1.29
SSBP4-208ENST00000600628 HSD17B6O14756 317 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 LANCL1O43813 399 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 TMEM127O75204 238 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 PROP1O75360 226 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 TNFAIP8O95379 198 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 IGHV3-7P01780 117 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 IGHV3-43DP0DP04 118 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 GADD45AP24522 165 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 CD24P25063 80 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 CD1BP29016 333 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 VEGFCP49767 419 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 SCAND1P57086 179 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 GNMTQ14749 295 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 HERPUD1Q15011 391 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 HES5Q5TA89 166 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 ZNF833PQ6ZTB9 187 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 DRAM1Q8N682 238 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 OR56B1Q8NGI3 324 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 TOMM40LQ969M1 308 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 RPEQ96AT9 228 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 HDHD3Q9BSH5 251 aaPredicted RBP6.99□□□□□ -1.29
SSBP4-208ENST00000600628 SLC25A33Q9BSK2 321 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 PRSS22Q9GZN4 317 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 Q9N2K0 584 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 PLEKHJ1Q9NW61 149 aa6.99□□□□□ -1.29
SSBP4-208ENST00000600628 A0A087WXM4 84 aa6.98□□□□□ -1.29
SSBP4-208ENST00000600628 FGF16O43320 207 aa6.98□□□□□ -1.29
SSBP4-208ENST00000600628 TXNL1O43396 289 aa6.98□□□□□ -1.29
SSBP4-208ENST00000600628 GAPDHP04406 335 aaKnown RBP6.98□□□□□ -1.29
SSBP4-208ENST00000600628 SNRNP70P08621 437 aaKnown RBP6.98□□□□□ -1.29
SSBP4-208ENST00000600628 SLC2A2P11168 524 aaPredicted RBP6.98□□□□□ -1.29
SSBP4-208ENST00000600628 CD36P16671 472 aa6.98□□□□□ -1.29
SSBP4-208ENST00000600628 MYL9P24844 172 aa6.98□□□□□ -1.29
SSBP4-208ENST00000600628 SDC2P34741 201 aa6.98□□□□□ -1.29
SSBP4-208ENST00000600628 PPP1CCP36873 323 aaKnown RBP6.98□□□□□ -1.29
SSBP4-208ENST00000600628 MNDAP41218 407 aa6.98□□□□□ -1.29
SSBP4-208ENST00000600628 GNG10P50151 68 aa6.98□□□□□ -1.29
SSBP4-208ENST00000600628 ARHGDIBP52566 201 aa6.98□□□□□ -1.29
SSBP4-208ENST00000600628 LTC4SQ16873 150 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms