RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CD34P28906 385 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 PTGFRP43088 359 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 CFHR3Q02985 330 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 HLA-DRB5Q30154 266 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 ANKRD13BQ86YJ7 626 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 TPRX1Q8N7U7 411 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 OR5D18Q8NGL1 313 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 DCUN1D4Q92564 292 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 CREB3L1Q96BA8 519 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 GON7Q9BXV9 100 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 RNF167Q9H6Y7 350 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 EXOSC4Q9NPD3 245 aaKnown RBP13.63□□□□□ -0.23
SSBP4-207ENST00000600244 GSTK1Q9Y2Q3 226 aa13.63□□□□□ -0.23
SSBP4-207ENST00000600244 TMEM82A0PJX8 343 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 OVOL1O14753 267 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 IGHG4P01861 327 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 NPBWR2P48146 333 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 OR52W1Q6IF63 320 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 GPR141Q7Z602 305 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 NR2C2APQ86WQ0 139 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 BATF2Q8N1L9 274 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 RPP25LQ8N5L8 163 aaKnown RBP13.62□□□□□ -0.23
SSBP4-207ENST00000600244 OR4D6Q8NGJ1 314 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 OR6Q1Q8NGQ2 317 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 MYOZ3Q8TDC0 251 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 SLAMF9Q96A28 289 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 SNX22Q96L94 193 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 CEP19Q96LK0 163 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 KCTD7Q96MP8 289 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 RHOFQ9HBH0 211 aa13.62□□□□□ -0.23
SSBP4-207ENST00000600244 AK6Q9Y3D8 172 aaKnown RBP13.62□□□□□ -0.23
SSBP4-207ENST00000600244 LOC100506127A0A0U1RQW1 187 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 I3L521 148 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 GABARAPO95166 117 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 TMEM225BP0DP42 221 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 MYL9P24844 172 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 RUNX1Q01196 453 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 ZNF616Q08AN1 781 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 EDDM3AQ14507 147 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 CTF1Q16619 201 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 GLT8D1Q68CQ7 371 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 ELP2Q6IA86 826 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 TPRA1Q86W33 373 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 Q8IYB0 196 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 TNFAIP8L1Q8WVP5 186 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 GPER1Q99527 375 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 NAA50Q9GZZ1 169 aaKnown RBP13.61□□□□□ -0.23
SSBP4-207ENST00000600244 SEBOXQ9HB31 216 aaPredicted RBP13.61□□□□□ -0.23
SSBP4-207ENST00000600244 ZNF286AQ9HBT8 521 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 IL36GQ9NZH8 169 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 KIAA1456Q9P272 454 aa13.61□□□□□ -0.23
SSBP4-207ENST00000600244 SLC22A1O15245 554 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 CYB5AP00167 134 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 TMEM11P17152 192 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 BCL3P20749 454 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 PSMB8P28062 276 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 GDNFP39905 211 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 GPR12P47775 334 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 PSMD7P51665 324 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 KIAA0141Q14154 515 aaPredicted RBP13.6□□□□□ -0.23
SSBP4-207ENST00000600244 PRAMEF5Q5TYX0 476 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 HEPN1Q6WQI6 88 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 SGPP2Q8IWX5 399 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 JAGN1Q8N5M9 183 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 OR56B4Q8NH76 319 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 RBFOX1Q9NWB1 397 aaKnown RBP13.6□□□□□ -0.23
SSBP4-207ENST00000600244 V9GY05 133 aa13.6□□□□□ -0.23
SSBP4-207ENST00000600244 FAM172BPA6NC97 362 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 SLC17A2O00624 439 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 PDCD5O14737 125 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 CDRT1O95170 752 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 RAB3BP20337 219 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 SDC2P34741 201 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 TGFBR1P36897 503 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 OR10A3P58181 314 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 HNF4GQ14541 408 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 GPR107Q5VW38 600 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 ABCG5Q9H222 651 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 GNB4Q9HAV0 340 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 HMG20AQ9NP66 347 aa13.59□□□□□ -0.23
SSBP4-207ENST00000600244 MRPS28Q9Y2Q9 187 aaKnown RBP13.59□□□□□ -0.23
SSBP4-207ENST00000600244 UBE2J1Q9Y385 318 aaPredicted RBP13.59□□□□□ -0.23
SSBP4-207ENST00000600244 CDK2P24941 298 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 GNB1P62873 340 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 QRFPP83859 136 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 HES1Q14469 280 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 ZNF146Q15072 292 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 ACSM6Q6P461 480 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 FAM58AQ8N1B3 248 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 OR51T1Q8NGJ9 327 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 OR6M1Q8NGM8 313 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 DLX4Q92988 240 aaPredicted RBP13.58□□□□□ -0.24
SSBP4-207ENST00000600244 UBE2E2Q96LR5 201 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 NABP2Q9BQ15 211 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 FAM192AQ9GZU8 254 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 PCDHB16Q9NRJ7 776 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 GHRLQ9UBU3 117 aa13.58□□□□□ -0.24
SSBP4-207ENST00000600244 MUC4Q99102 2169 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 A0A1W2PPI3 338 aa13.57□□□□□ -0.24
SSBP4-207ENST00000600244 IFITM5A6NNB3 132 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms