RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 OR2T10Q8NGZ9 312 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 FAM110DQ8TAY7 271 aaPredicted RBP11.32□□□□□ -0.6
LIG1-218ENST00000599322 FAAP24Q9BTP7 215 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 MBNL3Q9NUK0 354 aaKnown RBP11.32□□□□□ -0.6
LIG1-218ENST00000599322 JPT1Q9UK76 154 aa11.32□□□□□ -0.6
LIG1-218ENST00000599322 TRAV1-2A0A0B4J238 106 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 CD37P11049 281 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 GALP22466 123 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 LOXL3P58215 753 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 HTD2P86397 168 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 HNF4GQ14541 408 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 SIGIRRQ6IA17 410 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 C6orf201Q7Z4U5 140 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 OR51D1Q8NGF3 324 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 OR4X2Q8NGF9 303 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 OR1L1Q8NH94 360 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 MRPL30Q8TCC3 161 aaKnown RBP11.31□□□□□ -0.6
LIG1-218ENST00000599322 FAM3DQ96BQ1 224 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 NDUFB11Q9NX14 153 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 RAB22AQ9UL26 194 aa11.31□□□□□ -0.6
LIG1-218ENST00000599322 TRDV1A0A1B0GX56 115 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 A0A1W2PPI3 338 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 METTL21EPA6NDL7 271 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 FAM90A9PA6NNJ1 464 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 NCBP2LA6PVI3 153 aaKnown RBP11.3□□□□□ -0.6
LIG1-218ENST00000599322 FGF16O43320 207 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 IGKV1D-33P01593 117 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 IGKV1-33P01594 117 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 OPN1MWP04001 364 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 OPN1MW2P0DN77 364 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 OPN1MW3P0DN78 364 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 RAB3BP20337 219 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 GADD45AP24522 165 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 REG1BP48304 166 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 NSUN5P1Q3KNT7 163 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 C2orf76Q3KRA6 126 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 PDLIM3Q53GG5 364 aaPredicted RBP11.3□□□□□ -0.6
LIG1-218ENST00000599322 SLC25A48Q6ZT89 311 aaKnown RBP11.3□□□□□ -0.6
LIG1-218ENST00000599322 LYG1Q8N1E2 194 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 OR2AK2Q8NG84 335 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 OR4F17Q8NGA8 305 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 OR5AU1Q8NGC0 362 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 IL1F10Q8WWZ1 152 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 CFHR4Q92496 578 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 OR4F4Q96R69 305 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 SULT4A1Q9BR01 284 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 HSF4Q9ULV5 492 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 SSR3Q9UNL2 185 aa11.3□□□□□ -0.6
LIG1-218ENST00000599322 PRKDCP78527 4128 aaKnown RBP11.29□□□□□ -0.6
LIG1-218ENST00000599322 VWFP04275 2813 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 HSPA12AO43301 675 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 YPEL1O60688 119 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 CD1BP29016 333 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 VEGFCP49767 419 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 DEFA6Q01524 100 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 UNC119Q13432 240 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 MORN2Q502X0 79 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 HES5Q5TA89 166 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 UBE2UQ5VVX9 321 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 NDUFA11Q86Y39 141 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 FOXRED2Q8IWF2 684 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 SPARTQ8N0X7 666 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 OR8H1Q8NGG4 311 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 RTN4IP1Q8WWV3 396 aaPredicted RBP11.29□□□□□ -0.6
LIG1-218ENST00000599322 YPEL2Q96QA6 119 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 CMSS1Q9BQ75 279 aaKnown RBP11.29□□□□□ -0.6
LIG1-218ENST00000599322 NICN1Q9BSH3 213 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 ABHD14AQ9BUJ0 271 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 LPAR5Q9H1C0 372 aa11.29□□□□□ -0.6
LIG1-218ENST00000599322 RRP15Q9Y3B9 282 aaKnown RBP11.29□□□□□ -0.6
LIG1-218ENST00000599322 TET2Q6N021 2002 aaPredicted RBP11.28□□□□□ -0.6
LIG1-218ENST00000599322 SOCS1O15524 211 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 MOSP00540 346 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 CD3GP09693 182 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 CLDN12P56749 244 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 SLC35B1P78383 322 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 QRFPP83859 136 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 ARL6IP1Q15041 203 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 SSX1Q16384 188 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 CT45A1Q5HYN5 189 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 LY6G6FQ5SQ64 297 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 UTF1Q5T230 341 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 FAM89BQ8N5H3 189 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 OR52L2PQ8NGH6 319 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 CT45A3Q8NHU0 189 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 S1PR3Q99500 378 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 RASL11BQ9BPW5 248 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 CENPOQ9BU64 300 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 GON7Q9BXV9 100 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 WNT10AQ9GZT5 417 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 GHITMQ9H3K2 345 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 VCX3AQ9NNX9 186 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 C12orf4Q9NQ89 552 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 WNK1Q9H4A3 2382 aa11.28□□□□□ -0.6
LIG1-218ENST00000599322 IGHV3-72A0A0B4J1Y9 119 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 IFITM5A6NNB3 132 aa11.27□□□□□ -0.61
LIG1-218ENST00000599322 SERPINE3A8MV23 424 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms