RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 CT45A3Q8NHU0 189 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 WFDC12Q8WWY7 111 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 LEAP2Q969E1 77 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 ARHGAP5-AS1Q96IT6 56 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 YPEL2Q96QA6 119 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 CENPOQ9BU64 300 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 PECRQ9BY49 303 aa14.14□□□□□ -0.15
USHBP1-209ENST00000598570 ITGB1BP1O14713 200 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 BRS3P32247 399 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 VEGFCP49767 419 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 RAB7AP51149 207 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 SRSF7Q16629 238 aaKnown RBP eCLIP14.13□□□□□ -0.15
USHBP1-209ENST00000598570 NKAPLQ5M9Q1 402 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 C11orf88Q6PI97 169 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 OR8H3Q8N146 312 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 WIPF2Q8TF74 440 aaPredicted RBP14.13□□□□□ -0.15
USHBP1-209ENST00000598570 CITED1Q99966 193 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 CHCHD6Q9BRQ6 235 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 TOLLIPQ9H0E2 274 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 KCNIP1Q9NZI2 227 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 AK3Q9UIJ7 227 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 JPT1Q9UK76 154 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 MGAT4AQ9UM21 535 aa14.13□□□□□ -0.15
USHBP1-209ENST00000598570 TRRAPQ9Y4A5 3859 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 MFNGO00587 321 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 SLC2A2P11168 524 aaPredicted RBP14.12□□□□□ -0.15
USHBP1-209ENST00000598570 KRTAP10-3P60369 221 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 DIAPH2-AS1Q14236 149 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 LY6EQ16553 131 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 MOGAT2Q3SYC2 334 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 TIMM50Q3ZCQ8 353 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 SFXN4Q6P4A7 337 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 Q6ZS49 121 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 OR10R2Q8NGX6 335 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 RNF167Q9H6Y7 350 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 Q9N2K0 584 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 ABCB10Q9NRK6 738 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 RNF114Q9Y508 228 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 MGAM2Q2M2H8 2515 aa14.12□□□□□ -0.15
USHBP1-209ENST00000598570 NBEAL1Q6ZS30 2694 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 A0A0B4J203 849 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 DIRAS3O95661 229 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 AMY1AP04745 511 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 AMY2AP04746 511 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 SMIM18P0DKX4 95 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 ARHGDIBP52566 201 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 FBLN7Q53RD9 439 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 C5orf24Q7Z6I8 188 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 OR13F1Q8NGS4 319 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 GALMQ96C23 342 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 RBM14Q96PK6 669 aaKnown RBP14.11□□□□□ -0.15
USHBP1-209ENST00000598570 NPFFR1Q9GZQ6 430 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 ZNF702PQ9H963 129 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 VCX3AQ9NNX9 186 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 C12orf4Q9NQ89 552 aa14.11□□□□□ -0.15
USHBP1-209ENST00000598570 METTL21EPA6NDL7 271 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 SLC31A2O15432 143 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 LANCL1O43813 399 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 OR2F2O95006 317 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 IGHV3-7P01780 117 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 GAPDHP04406 335 aaKnown RBP14.1□□□□□ -0.15
USHBP1-209ENST00000598570 CLEC2LP0C7M8 214 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 MNDAP41218 407 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 LTC4SQ16873 150 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 ODF3L1Q8IXM7 274 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 UBALD1Q8TB05 177 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 RPEQ96AT9 228 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 RAB3CQ96E17 227 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 OR2S2Q9NQN1 319 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 SERTAD4Q9NUC0 356 aa14.1□□□□□ -0.15
USHBP1-209ENST00000598570 SERPINE3A8MV23 424 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 TIMM23O14925 209 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 HIST1H1DP16402 221 aaKnown RBP14.09□□□□□ -0.15
USHBP1-209ENST00000598570 ARL6IP1Q15041 203 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 PLA1AQ53H76 456 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 TMEM219Q86XT9 240 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 IZUMO1Q8IYV9 350 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 Q8N6K4 173 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 OR52L2PQ8NGH6 319 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 OR4C13Q8NGP0 309 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 OR10X1Q8NGY0 326 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 SGMS2Q8NHU3 365 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 RTN4IP1Q8WWV3 396 aaPredicted RBP14.09□□□□□ -0.15
USHBP1-209ENST00000598570 TOMM40LQ969M1 308 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 AGMATQ9BSE5 352 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 HDHD3Q9BSH5 251 aaPredicted RBP14.09□□□□□ -0.15
USHBP1-209ENST00000598570 WNT10AQ9GZT5 417 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 GNG12Q9UBI6 72 aa14.09□□□□□ -0.15
USHBP1-209ENST00000598570 IGHV3-43A0A0B4J1X8 118 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 IGHV1-3A0A0C4DH29 117 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 LOC100506127A0A0U1RQW1 187 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 A0A1W2PPE3 182 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 AIREO43918 545 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 FAM106CPP0CH98 169 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 IGHV3-43DP0DP04 118 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 CD1BP29016 333 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 GNG10P50151 68 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 GNMTQ14749 295 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 PRR31Q5SQ13 230 aa14.08□□□□□ -0.16
USHBP1-209ENST00000598570 CROCCP3Q8IVE0 287 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms