RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 OR2S2Q9NQN1 319 aa18.22■□□□□ 0.51
SSBP4-205ENST00000598159 SERPINE3A8MV23 424 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 SLC31A2O15432 143 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 MOSP00540 346 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 PF4P02776 101 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 VSIG8P0DPA2 414 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 MORN2Q502X0 79 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 SLC35E3Q7Z769 313 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 FOXRED2Q8IWF2 684 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 Q8N6K4 173 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 OR10V1Q8NGI7 309 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 UFD1Q92890 307 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 ISYNA1Q9NPH2 558 aa18.21■□□□□ 0.51
SSBP4-205ENST00000598159 UCHL1P09936 223 aa18.2■□□□□ 0.5
SSBP4-205ENST00000598159 MYF6P23409 242 aa18.2■□□□□ 0.5
SSBP4-205ENST00000598159 HTR2CP28335 458 aa18.2■□□□□ 0.5
SSBP4-205ENST00000598159 SLC35B1P78383 322 aa18.2■□□□□ 0.5
SSBP4-205ENST00000598159 KHDC1LQ5JSQ8 128 aa18.2■□□□□ 0.5
SSBP4-205ENST00000598159 ZNF329Q86UD4 541 aa18.2■□□□□ 0.5
SSBP4-205ENST00000598159 OR8H1Q8NGG4 311 aa18.2■□□□□ 0.5
SSBP4-205ENST00000598159 MRPL30Q8TCC3 161 aaKnown RBP18.2■□□□□ 0.5
SSBP4-205ENST00000598159 SGCDQ92629 289 aa18.2■□□□□ 0.5
SSBP4-205ENST00000598159 NOL4LQ96MY1 436 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-205ENST00000598159 LIN7CQ9NUP9 197 aaKnown RBP18.2■□□□□ 0.5
SSBP4-205ENST00000598159 TGP01266 2768 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 CHATP28329 748 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 RPS27AP62979 156 aaKnown RBP18.19■□□□□ 0.5
SSBP4-205ENST00000598159 HTD2P86397 168 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 TPBGQ13641 420 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 TRAM1Q15629 374 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 NKAPLQ5M9Q1 402 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 LIPKQ5VXJ0 399 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 OR10K2Q6IF99 312 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 COMMD1Q8N668 190 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 TM2D1Q9BX74 207 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 TMEM59Q9BXS4 323 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 ANKRD60Q9BZ19 345 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 ABCG5Q9H222 651 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 VCX3BQ9H321 246 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 ZFP57Q9NU63 452 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 NECAP2Q9NVZ3 263 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 JPT1Q9UK76 154 aa18.19■□□□□ 0.5
SSBP4-205ENST00000598159 SLC22A1O15245 554 aa18.18■□□□□ 0.5
SSBP4-205ENST00000598159 RGS10O43665 173 aa18.18■□□□□ 0.5
SSBP4-205ENST00000598159 LANCL1O43813 399 aa18.18■□□□□ 0.5
SSBP4-205ENST00000598159 LY6G6FQ5SQ64 297 aa18.18■□□□□ 0.5
SSBP4-205ENST00000598159 Q8N9W7 124 aa18.18■□□□□ 0.5
SSBP4-205ENST00000598159 PHF21AQ96BD5 680 aa18.18■□□□□ 0.5
SSBP4-205ENST00000598159 GALMQ96C23 342 aa18.18■□□□□ 0.5
SSBP4-205ENST00000598159 FAAP24Q9BTP7 215 aa18.18■□□□□ 0.5
SSBP4-205ENST00000598159 GON7Q9BXV9 100 aa18.18■□□□□ 0.5
SSBP4-205ENST00000598159 PLSCR3Q9NRY6 295 aa18.18■□□□□ 0.5
SSBP4-205ENST00000598159 PRKDCP78527 4128 aaKnown RBP18.17■□□□□ 0.5
SSBP4-205ENST00000598159 YPEL1O60688 119 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 RGS11O94810 467 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 BPNT1O95861 308 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 PRB2P02812 416 aaPredicted RBP18.17■□□□□ 0.5
SSBP4-205ENST00000598159 HSMCR30P0CW71 290 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 IGLL1P15814 213 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 STPG2Q8N412 459 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 OR51D1Q8NGF3 324 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 OR52L2PQ8NGH6 319 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 OR6M1Q8NGM8 313 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 TMEM203Q969S6 136 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 YPEL2Q96QA6 119 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 S1PR3Q99500 378 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 RASL11BQ9BPW5 248 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 SULT4A1Q9BR01 284 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 LINC00527Q9UJ94 153 aa18.17■□□□□ 0.5
SSBP4-205ENST00000598159 TMEM14DPA8MWL7 114 aa18.16■□□□□ 0.5
SSBP4-205ENST00000598159 ZNF736B4DX44 427 aaPredicted RBP18.16■□□□□ 0.5
SSBP4-205ENST00000598159 AP4M1O00189 453 aa18.16■□□□□ 0.5
SSBP4-205ENST00000598159 DUS4LO95620 317 aaKnown RBP18.16■□□□□ 0.5
SSBP4-205ENST00000598159 PSMA1P25786 263 aaKnown RBP18.16■□□□□ 0.5
SSBP4-205ENST00000598159 SLC6A1P30531 599 aa18.16■□□□□ 0.5
SSBP4-205ENST00000598159 RPL23AP62750 156 aaKnown RBP18.16■□□□□ 0.5
SSBP4-205ENST00000598159 QRFPP83859 136 aa18.16■□□□□ 0.5
SSBP4-205ENST00000598159 TMEM91Q6ZNR0 172 aa18.16■□□□□ 0.5
SSBP4-205ENST00000598159 C6orf201Q7Z4U5 140 aa18.16■□□□□ 0.5
SSBP4-205ENST00000598159 RCC1LQ96I51 464 aaKnown RBP18.16■□□□□ 0.5
SSBP4-205ENST00000598159 LINC01548A6NM66 108 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 ARL6IP5O75915 188 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 CPEP16870 476 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 CRHBPP24387 322 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 BLVRBP30043 206 aaPredicted RBP18.15■□□□□ 0.5
SSBP4-205ENST00000598159 RANBP1P43487 201 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 GPR12P47775 334 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 MLLT11Q13015 90 aaPredicted RBP18.15■□□□□ 0.5
SSBP4-205ENST00000598159 UNC119Q13432 240 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 FOXB2Q5VYV0 432 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 PRSS48Q7RTY5 328 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 CYYR1Q96J86 154 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 URM1Q9BTM9 101 aaKnown RBP18.15■□□□□ 0.5
SSBP4-205ENST00000598159 ABHD14AQ9BUJ0 271 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 CCDC90BQ9GZT6 254 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 PLEKHJ1Q9NW61 149 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 ABRACLQ9P1F3 81 aa18.15■□□□□ 0.5
SSBP4-205ENST00000598159 PPP1CCP36873 323 aaKnown RBP18.14■□□□□ 0.49
SSBP4-205ENST00000598159 GNMTQ14749 295 aa18.14■□□□□ 0.49
SSBP4-205ENST00000598159 HMGN3Q15651 99 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms