RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	PGLYRP3	Q96LB9	341 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	OR14A2	Q96R54	314 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	ASCL2	Q99929	193 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	KLK15	Q9H2R5	256 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	GNB4	Q9HAV0	340 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	SPACA1	Q9HBV2	294 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	SMPD3	Q9NY59	655 aa	Predicted RBP	8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	CKLF	Q9UBR5	152 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	ZNF107	Q9UII5	783 aa	Predicted RBP	8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	SCOC	Q9UIL1	159 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	DIMT1	Q9UNQ2	313 aa	Known RBP	8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	EXOSC1	Q9Y3B2	195 aa	Known RBP	8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	PEX16	Q9Y5Y5	336 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	WSB1	Q9Y6I7	421 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776		U3KQK5	164 aa		8.22	□□□□□ -1.09
LSM4-205	ENST00000597776	TRBV5-7	A0A0A0MS05	114 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	UBE2QL1	A1L167	161 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776		G3V318	75 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	LANCL1	O43813	399 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	GPX5	O75715	221 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	BAG2	O95816	211 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	IGF1	P05019	195 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	NHLRC4	P0CG21	123 aa	Predicted RBP	8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	FST	P19883	344 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	CNTFR	P26992	372 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	FHL3	Q13643	280 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	GPR176	Q14439	515 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	MMD	Q15546	238 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	TMEM30B	Q3MIR4	351 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	ZNF260	Q3ZCT1	412 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	YIF1B	Q5BJH7	314 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	ASPHD1	Q5U4P2	390 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	SIGIRR	Q6IA17	410 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	GAPT	Q8N292	157 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	ZNF485	Q8NCK3	441 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	OR52L2P	Q8NGH6	319 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	RITA1	Q96K30	269 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	OR5B12	Q96R08	314 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	MRPL20	Q9BYC9	149 aa	Known RBP	8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	SELENOI	Q9C0D9	397 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	TAF9B	Q9HBM6	251 aa		8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	HUWE1	Q7Z6Z7	4374 aa	Known RBP	8.21	□□□□□ -1.1
LSM4-205	ENST00000597776	IRGM	A1A4Y4	181 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	ATP6V0E1	O15342	81 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	CRTAP	O75718	401 aa	Predicted RBP	8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	MAS1	P04201	325 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	MGMT	P16455	207 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	PPP1CC	P36873	323 aa	Known RBP	8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	GNB1	P62873	340 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	DOC2B	Q14184	412 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	MORN2	Q502X0	79 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	ODF3L1	Q8IXM7	274 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	OR11H1	Q8NG94	326 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	MYOZ3	Q8TDC0	251 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	CYGB	Q8WWM9	190 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	FAM46B	Q96A09	425 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	MRPS24	Q96EL2	167 aa	Known RBP	8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	TMEM80	Q96HE8	168 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776		Q96M66	194 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	RDH12	Q96NR8	316 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	ABHD14A	Q9BUJ0	271 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	RAB9B	Q9NP90	201 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	OR2S2	Q9NQN1	319 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	PARP11	Q9NR21	331 aa		8.2	□□□□□ -1.1
LSM4-205	ENST00000597776	SC5D	O75845	299 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	LY86	O95711	162 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	OR5H8	P0DN80	308 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	FUT3	P21217	361 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	PPIF	P30405	207 aa	Known RBP	8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	OR3A3	P47888	321 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	ACTB	P60709	375 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	KIAA0141	Q14154	515 aa	Predicted RBP	8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	LRRC36	Q1X8D7	754 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	STEAP3	Q658P3	488 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	TMEM65	Q6PI78	240 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	TRAT1	Q6PIZ9	186 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	LYPD6	Q86Y78	171 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	C10orf67	Q8IYJ2	551 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	MRPL30	Q8TCC3	161 aa	Known RBP	8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	GGH	Q92820	318 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	DERL3	Q96Q80	235 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	NABP2	Q9BQ15	211 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	ANKRD60	Q9BZ19	345 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	MBNL3	Q9NUK0	354 aa	Known RBP	8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	CHCHD3	Q9NX63	227 aa	Known RBP	8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	ZNF580	Q9UK33	172 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	ZNF256	Q9Y2P7	627 aa	Predicted RBP	8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	STAB2	Q8WWQ8	2551 aa		8.19	□□□□□ -1.1
LSM4-205	ENST00000597776	IGHV7-81	A0A0B4J1V7	117 aa		8.18	□□□□□ -1.1
LSM4-205	ENST00000597776	TRAV41	A0A0B4J266	112 aa		8.18	□□□□□ -1.1
LSM4-205	ENST00000597776	FAM90A10P	A6NDY2	464 aa		8.18	□□□□□ -1.1
LSM4-205	ENST00000597776	FAM90A7P	A6NKC0	464 aa		8.18	□□□□□ -1.1
LSM4-205	ENST00000597776	FAM90A23P	A8MXZ1	464 aa		8.18	□□□□□ -1.1
LSM4-205	ENST00000597776		I3L521	148 aa		8.18	□□□□□ -1.1
LSM4-205	ENST00000597776	PDCD6	O75340	191 aa		8.18	□□□□□ -1.1
LSM4-205	ENST00000597776	CA11	O75493	328 aa		8.18	□□□□□ -1.1
LSM4-205	ENST00000597776	IGLV1-40	P01703	118 aa		8.18	□□□□□ -1.1
LSM4-205	ENST00000597776	HLA-DRB1	P01911	266 aa		8.18	□□□□□ -1.1
LSM4-205	ENST00000597776	BLVRB	P30043	206 aa	Predicted RBP	8.18	□□□□□ -1.1
LSM4-205	ENST00000597776	CAPG	P40121	348 aa		8.18	□□□□□ -1.1

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms