RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 AADACL3Q5VUY0 350 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 OR52L2PQ8NGH6 319 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 MRGPRFQ96AM1 343 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 MOB3AQ96BX8 217 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 FXYD6Q9H0Q3 95 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 OR2S2Q9NQN1 319 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 GNG12Q9UBI6 72 aa12.07□□□□□ -0.48
VRK3-212ENST00000596814 TRAV6A0A075B6T7 132 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 FAM172BPA6NC97 362 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 LIPFP07098 398 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 CEACAM6P40199 344 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 ECI1P42126 302 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 DLX6P56179 175 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 FXYD4P59646 89 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 PRAMEF5Q5TYX0 476 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 PRSS57Q6UWY2 283 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 LY6G5BQ8NDX9 201 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 OR10V1Q8NGI7 309 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 CREB3L1Q96BA8 519 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 RDH8Q9NYR8 311 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 ARPC1BO15143 372 aaKnown RBP12.06□□□□□ -0.48
VRK3-212ENST00000596814 FOXH1O75593 365 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 USF1P22415 310 aaPredicted RBP12.06□□□□□ -0.48
VRK3-212ENST00000596814 ZFP36P26651 326 aaKnown RBP12.06□□□□□ -0.48
VRK3-212ENST00000596814 PPP1CCP36873 323 aaKnown RBP12.06□□□□□ -0.48
VRK3-212ENST00000596814 LCN2P80188 198 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 HEPN1Q6WQI6 88 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 ZDHHC22Q8N966 263 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 OR10A7Q8NGE5 316 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 MARCH1Q8TCQ1 289 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 TOMM40LQ969M1 308 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 TOLLIPQ9H0E2 274 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 GFOD1Q9NXC2 390 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 OR2W1Q9Y3N9 320 aa12.06□□□□□ -0.48
VRK3-212ENST00000596814 ENSAO43768 121 aaKnown RBP12.05□□□□□ -0.48
VRK3-212ENST00000596814 MMP23AO75900 390 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 H2AFB2P0C5Z0 115 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 PGAM2P15259 253 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 NFYBP25208 207 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 LOXL3P58215 753 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 FAM53AQ6NSI3 398 aaPredicted RBP12.05□□□□□ -0.48
VRK3-212ENST00000596814 OR52M1Q8NGK5 317 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 SCGB3A2Q96PL1 93 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 MARVELD1Q9BSK0 173 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 PARP12Q9H0J9 701 aaKnown RBP12.05□□□□□ -0.48
VRK3-212ENST00000596814 ONECUT1Q9UBC0 465 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 FLVCR2Q9UPI3 526 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 VSIG4Q9Y279 399 aa12.05□□□□□ -0.48
VRK3-212ENST00000596814 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 ABCA2Q9BZC7 2435 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 C17orf98A8MV24 154 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 FAM157AC9JC47 383 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 INMT-MINDY4F8WBC2 141 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 YPEL1O60688 119 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 RGS11O94810 467 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 RLN1P04808 185 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 BAMBIQ13145 260 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 SURF2Q15527 256 aaPredicted RBP12.04□□□□□ -0.48
VRK3-212ENST00000596814 KRTAP1-3Q8IUG1 177 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 YPEL2Q96QA6 119 aa12.04□□□□□ -0.48
VRK3-212ENST00000596814 A0A096LNT2 108 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 IGKV1D-13A0A0B4J2D9 117 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 RBP4P02753 201 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 IGKV1-13P0DP09 117 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 LUMP51884 338 aaPredicted RBP12.03□□□□□ -0.48
VRK3-212ENST00000596814 UCP3P55916 312 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 RAB25P57735 213 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 MORN2Q502X0 79 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 Q6ZNX1 250 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 TMED4Q7Z7H5 227 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 SECTM1Q8WVN6 248 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 EDARADDQ8WWZ3 215 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 DMRTB1Q96MA1 342 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 GPR132Q9UNW8 380 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 RBM7Q9Y580 266 aaKnown RBP12.03□□□□□ -0.48
VRK3-212ENST00000596814 IGHV2-70DA0A0C4DH43 119 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 hCG_1809904A0A1W2PP81 198 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 A0A1W2PPE2 198 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 A0A1W2PR64 198 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 A0A1W2PRV1 198 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 M0R1W7 72 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 PEX14O75381 377 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 IGHV1-8P0DP01 117 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 RAG2P55895 527 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 ERVFRD-1P60508 538 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 PAX2Q02962 417 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 SLC38A6Q8IZM9 456 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 C11orf42Q8N5U0 333 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 OR2AK2Q8NG84 335 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 ZFAND1Q8TCF1 268 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 LEAP2Q969E1 77 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 DACT3Q96B18 629 aaPredicted RBP12.03□□□□□ -0.48
VRK3-212ENST00000596814 Q96MF0 132 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 SLC5A7Q9GZV3 580 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 LPAR2Q9HBW0 351 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 C14orf166Q9Y224 244 aaKnown RBP12.03□□□□□ -0.48
VRK3-212ENST00000596814 POLR3KQ9Y2Y1 108 aaPredicted RBP12.03□□□□□ -0.48
VRK3-212ENST00000596814 SESN1Q9Y6P5 492 aa12.03□□□□□ -0.48
VRK3-212ENST00000596814 ITPR2Q14571 2701 aa12.02□□□□□ -0.49
VRK3-212ENST00000596814 MED13LQ71F56 2210 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms