RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SFXN4Q6P4A7 337 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 ZNF880Q6PDB4 577 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 Q6ZTK2 550 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 DRAM1Q8N682 238 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 OR10A7Q8NGE5 316 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 OR52M1Q8NGK5 317 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 OR5H6Q8NGV6 325 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 OR4F5Q8NH21 305 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 CT45A3Q8NHU0 189 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 ZNF747Q9BV97 191 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 CHMP1AQ9HD42 196 aaPredicted RBP9.24□□□□□ -0.93
VMP1-211ENST00000591315 GNG12Q9UBI6 72 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 FBN3Q75N90 2809 aa9.24□□□□□ -0.93
VMP1-211ENST00000591315 IGHV3-72A0A0B4J1Y9 119 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 TIMM23O14925 209 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 SPINT2O43291 252 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 TSPAN9O75954 239 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 DYNLT3P51808 116 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 PROK1P58294 105 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 BLCAPP62952 87 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 OR56B1Q8NGI3 324 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 OR10X1Q8NGY0 326 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 OR56B4Q8NH76 319 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 LGALS14Q8TCE9 139 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 WFDC12Q8WWY7 111 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 MAFIPQ8WZ33 124 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 TOMM40LQ969M1 308 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 RPEQ96AT9 228 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 BEX1Q9HBH7 125 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 OR2S2Q9NQN1 319 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 HSF4Q9ULV5 492 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 RNF114Q9Y508 228 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 MMP24Q9Y5R2 645 aa9.23□□□□□ -0.93
VMP1-211ENST00000591315 ZNF736B4DX44 427 aaPredicted RBP9.22□□□□□ -0.93
VMP1-211ENST00000591315 H3BUI4 141 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 AIREO43918 545 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 SCTP09683 121 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 RAB6AP20340 208 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 MADCAM1Q13477 382 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 HNF4GQ14541 408 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 TMEM95Q3KNT9 176 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 MORN2Q502X0 79 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 IDNKQ5T6J7 187 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 SLC16A12Q6ZSM3 486 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 TPRA1Q86W33 373 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 IZUMO1Q8IYV9 350 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 LINC00311Q8N616 119 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 OR10R2Q8NGX6 335 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 CAPSLQ8WWF8 208 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 IL1F10Q8WWZ1 152 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 CFHR4Q92496 578 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 ST6GALNAC6Q969X2 333 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 RAB3CQ96E17 227 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 CMSS1Q9BQ75 279 aaKnown RBP9.22□□□□□ -0.93
VMP1-211ENST00000591315 NAA50Q9GZZ1 169 aaKnown RBP9.22□□□□□ -0.93
VMP1-211ENST00000591315 ATG5Q9H1Y0 275 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 C16orf95Q9H693 158 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 ZNF702PQ9H963 129 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 Q9N2K0 584 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 KCNIP1Q9NZI2 227 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 OR1A1Q9P1Q5 309 aa9.22□□□□□ -0.93
VMP1-211ENST00000591315 IGKV1D-8A0A087WSZ0 117 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 TRBV6-6A0A0A6YYG2 114 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 IGKV1-6A0A0C4DH72 117 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 MFNGO00587 321 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 HSD17B6O14756 317 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 AMY1AP04745 511 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 AMY2AP04746 511 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 SNRNP70P08621 437 aaKnown RBP9.21□□□□□ -0.94
VMP1-211ENST00000591315 CD3GP09693 182 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 RPS19P39019 145 aaKnown RBP9.21□□□□□ -0.94
VMP1-211ENST00000591315 CEACAM3P40198 252 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 OR3A3P47888 321 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 RPL15P61313 204 aaKnown RBP9.21□□□□□ -0.94
VMP1-211ENST00000591315 NCS1P62166 190 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 TRAT1Q6PIZ9 186 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 SLC25A48Q6ZT89 311 aaKnown RBP9.21□□□□□ -0.94
VMP1-211ENST00000591315 MOB3BQ86TA1 216 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 DTX3Q8N9I9 347 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 KCTD12Q96CX2 325 aaKnown RBP9.21□□□□□ -0.94
VMP1-211ENST00000591315 SLC25A38Q96DW6 304 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 OCSTAMPQ9BR26 566 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 FUNDC2Q9BWH2 189 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 VCX3AQ9NNX9 186 aa9.21□□□□□ -0.94
VMP1-211ENST00000591315 ZNF230Q9UIE0 474 aaPredicted RBP9.21□□□□□ -0.94
VMP1-211ENST00000591315 AMMECR1Q9Y4X0 333 aaPredicted RBP9.21□□□□□ -0.94
VMP1-211ENST00000591315 PLXNB1O43157 2135 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 IGHV1-3A0A0C4DH29 117 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 FAM90A9PA6NNJ1 464 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 POM121CA8CG34 1229 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 ST8SIA5O15466 376 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 HIST1H1DP16402 221 aaKnown RBP9.2□□□□□ -0.94
VMP1-211ENST00000591315 BRS3P32247 399 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 KIR2DS4P43632 304 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 HLA-DRB3P79483 266 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 HERPUD1Q15011 391 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 ODF3L1Q8IXM7 274 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 LYG1Q8N1E2 194 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 C8orf31Q8N9H6 132 aa9.2□□□□□ -0.94
VMP1-211ENST00000591315 OR4C13Q8NGP0 309 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms