RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 OR13C5Q8NGS8 318 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 VSIG4Q9Y279 399 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 SC5DO75845 299 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 GTF2F2P13984 249 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 RCC1P18754 421 aaPredicted RBP14.26□□□□□ -0.13
CCDC43-204ENST00000588687 ADARB1P78563 741 aaKnown RBP14.26□□□□□ -0.13
CCDC43-204ENST00000588687 GNMTQ14749 295 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 STEAP3Q658P3 488 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 RPL22L1Q6P5R6 122 aaKnown RBP14.26□□□□□ -0.13
CCDC43-204ENST00000588687 MINDY2Q8NBR6 621 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 NEK7Q8TDX7 302 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 DCUN1D4Q92564 292 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 ZNF184Q99676 751 aaPredicted RBP14.26□□□□□ -0.13
CCDC43-204ENST00000588687 OR51J1Q9H342 316 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 PAK1IP1Q9NWT1 392 aaPredicted RBP14.26□□□□□ -0.13
CCDC43-204ENST00000588687 GAR1Q9NY12 217 aaKnown RBP14.26□□□□□ -0.13
CCDC43-204ENST00000588687 FAM53CQ9NYF3 392 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 GNG12Q9UBI6 72 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 WSB1Q9Y6I7 421 aa14.26□□□□□ -0.13
CCDC43-204ENST00000588687 PLECQ15149 4684 aaKnown RBP14.26□□□□□ -0.13
CCDC43-204ENST00000588687 TRBV5-5A0A0J9YX44 114 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 SPINT2O43291 252 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 SOX15O60248 233 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 ZNF780AO75290 641 aaPredicted RBP14.25□□□□□ -0.13
CCDC43-204ENST00000588687 LY86O95711 162 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 LALBAP00709 142 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 FRMD6-AS1P0C7T7 363 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 ETV1P50549 477 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 RASSF2P50749 326 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 ACTBP60709 375 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 PPP3R1P63098 170 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 RIPK1Q13546 671 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 OR2G6Q5TZ20 316 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 ZNF429Q86V71 674 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 OR4K15Q8NH41 348 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 SMIM19Q96E16 107 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 OR5B12Q96R08 314 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 MRPL20Q9BYC9 149 aaKnown RBP14.25□□□□□ -0.13
CCDC43-204ENST00000588687 ALX4Q9H161 411 aaPredicted RBP14.25□□□□□ -0.13
CCDC43-204ENST00000588687 SPACA1Q9HBV2 294 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 FGF20Q9NP95 211 aaPredicted RBP14.25□□□□□ -0.13
CCDC43-204ENST00000588687 TPSG1Q9NRR2 321 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 MBNL3Q9NUK0 354 aaKnown RBP14.25□□□□□ -0.13
CCDC43-204ENST00000588687 FBXO7Q9Y3I1 522 aa14.25□□□□□ -0.13
CCDC43-204ENST00000588687 TRAV8-7A0A075B6U6 113 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 GPX5O75715 221 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 SPNP16150 400 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 BLVRBP30043 206 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-204ENST00000588687 CRIP2P52943 208 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-204ENST00000588687 RPS11P62280 158 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCDC43-204ENST00000588687 SMN1Q16637 294 aaKnown RBP14.24□□□□□ -0.13
CCDC43-204ENST00000588687 C6orf183Q5T699 404 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 OVCH2Q7RTZ1 564 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 C5orf24Q7Z6I8 188 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 LYPD6Q86Y78 171 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 PRR18Q8N4B5 295 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 STX19Q8N4C7 294 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 DLX4Q92988 240 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-204ENST00000588687 Q96MT0 163 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 NABP2Q9BQ15 211 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 PARP11Q9NR21 331 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 ETAA1Q9NY74 926 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 TRAPPC2LQ9UL33 140 aa14.24□□□□□ -0.13
CCDC43-204ENST00000588687 TRAV41A0A0B4J266 112 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 OVOL1O14753 267 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 OGG1O15527 345 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 WBP4O75554 376 aaKnown RBP14.23□□□□□ -0.13
CCDC43-204ENST00000588687 NDUFA3O95167 84 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 FSTP19883 344 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 RAB9AP51151 201 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 C5orf64Q2M2E5 130 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 MORN2Q502X0 79 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 SIGIRRQ6IA17 410 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 RAB12Q6IQ22 244 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 ABHD14AQ9BUJ0 271 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 ANKRD60Q9BZ19 345 aa14.23□□□□□ -0.13
CCDC43-204ENST00000588687 RPL36Q9Y3U8 105 aaKnown RBP14.23□□□□□ -0.13
CCDC43-204ENST00000588687 LCE6AA0A183 80 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 TRIM64CA6NLI5 447 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 NBR2O15453 112 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 SLURP1P55000 103 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 C6orf141Q5SZD1 244 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 FAM27D1Q5T7N8 215 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 TMEM65Q6PI78 240 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 ZNF833PQ6ZTB9 187 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 NPBQ8NG41 125 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 MRPS24Q96EL2 167 aaKnown RBP14.22□□□□□ -0.13
CCDC43-204ENST00000588687 PGLYRP3Q96LB9 341 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 RDH12Q96NR8 316 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 S100A13Q99584 98 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 SLC29A1Q99808 456 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 TOLLIPQ9H0E2 274 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 TAF9BQ9HBM6 251 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 RAB9BQ9NP90 201 aa14.22□□□□□ -0.13
CCDC43-204ENST00000588687 LOC100130705A0A1B0GUX0 176 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 MCRIP1C9JLW8 97 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 SAP30O75446 220 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 CIB2O75838 187 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 ATP5HO75947 161 aa14.21□□□□□ -0.13
CCDC43-204ENST00000588687 GP9P14770 177 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms