RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 PET100P0DJ07 73 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 PTHLHP12272 177 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 ALDH3B1P43353 468 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 QRFPP83859 136 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 ASCL5Q7RTU5 278 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 ZNF738Q8NE65 137 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 OR4C5Q8NGB2 326 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 OR4X1Q8NH49 305 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 KCNG3Q8TAE7 436 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 TOMM40LQ969M1 308 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 SPSB1Q96BD6 273 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 MOB3AQ96BX8 217 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 TVP23CQ96ET8 276 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 RBKSQ9H477 322 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 SRD5A3Q9H8P0 318 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 CALHM2Q9HA72 323 aa8.29□□□□□ -1.08
LINC01539-201ENST00000587904 MRPS28Q9Y2Q9 187 aaKnown RBP8.29□□□□□ -1.08
LINC01539-201ENST00000587904 SLC22A20A6NK97 555 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 XRCC2O43543 280 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 SCGB1D1O95968 90 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 CHRM2P08172 466 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 DANCRP0C864 163 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 OR13C7P0DN81 318 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 VSIG8P0DPA2 414 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 WT1P19544 449 aaPredicted RBP8.28□□□□□ -1.08
LINC01539-201ENST00000587904 ARF1P84077 181 aaKnown RBP8.28□□□□□ -1.08
LINC01539-201ENST00000587904 SRSF6Q13247 344 aaKnown RBP8.28□□□□□ -1.08
LINC01539-201ENST00000587904 UNC119Q13432 240 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 RPL7L1Q6DKI1 246 aaKnown RBP8.28□□□□□ -1.08
LINC01539-201ENST00000587904 RPUSD3Q6P087 351 aaKnown RBP8.28□□□□□ -1.08
LINC01539-201ENST00000587904 TCF24Q7RTU0 167 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 PRDM14Q9GZV8 571 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 DEFB127Q9H1M4 99 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 LYRM2Q9NU23 88 aaPredicted RBP8.28□□□□□ -1.08
LINC01539-201ENST00000587904 PLA2G2EQ9NZK7 142 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 OR5AC2Q9NZP5 309 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 SPRR3Q9UBC9 169 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 RNF150Q9ULK6 438 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 ST3GAL6Q9Y274 331 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 PIGLQ9Y2B2 252 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 FREM2Q5SZK8 3169 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 XKRY2A2RUG3 117 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 C5orf51A6NDU8 294 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 MSGN1A6NI15 193 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 EEF1E1-BLOC1S5C9J1V9 151 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 E9PLN8 166 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 H0YIZ8 118 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 K7ERU9 68 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 AQP7O14520 342 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 MMP23AO75900 390 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 SEC11BP0C7V7 166 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 BMP5P22003 454 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 S100A7P31151 101 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 ID4P47928 161 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 TFPI2P48307 235 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 PRRX1P54821 245 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 TMEM33P57088 247 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 SLC9A3R2Q15599 337 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 SNAI3Q3KNW1 292 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 FBLN7Q53RD9 439 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 RNFT1Q5M7Z0 435 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 REEP6Q96HR9 211 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 ZNF48Q96MX3 618 aaPredicted RBP8.28□□□□□ -1.08
LINC01539-201ENST00000587904 GPER1Q99527 375 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 GINS3Q9BRX5 216 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 CST11Q9H112 138 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 SMPXQ9UHP9 88 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 MEMO1Q9Y316 297 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 COX11Q9Y6N1 276 aa8.28□□□□□ -1.08
LINC01539-201ENST00000587904 IGKV1-9A0A0C4DH69 117 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 HSD17B6O14756 317 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 OR5G3P0C626 314 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 SCGB1A1P11684 91 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 FAHP16930 419 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 ANOS1P23352 680 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 SCGB2A2Q13296 93 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 CNN3Q15417 329 aaKnown RBP8.27□□□□□ -1.09
LINC01539-201ENST00000587904 KISS1Q15726 138 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 BATFQ16520 125 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 TMEM183BQ1AE95 376 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 DEFB109BQ30KR1 87 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 SMIM21Q3B7S5 101 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 GLIPR1L1Q6UWM5 242 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 TEX43Q6ZNM6 134 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 OR8G5Q8NG78 346 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 AQP3Q92482 292 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 GMPPAQ96IJ6 420 aaPredicted RBP8.27□□□□□ -1.09
LINC01539-201ENST00000587904 C1QTNF5Q9BXJ0 243 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 CST9LQ9H4G1 147 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 GVINP1Q7Z2Y8 2422 aa8.27□□□□□ -1.09
LINC01539-201ENST00000587904 RIF1Q5UIP0 2472 aaKnown RBP8.26□□□□□ -1.09
LINC01539-201ENST00000587904 C5orf63A6NC05 138 aa8.26□□□□□ -1.09
LINC01539-201ENST00000587904 CLDN34H7C241 214 aa8.26□□□□□ -1.09
LINC01539-201ENST00000587904 SS18L1O75177 396 aaPredicted RBP8.26□□□□□ -1.09
LINC01539-201ENST00000587904 IGHV3-9P01782 118 aa8.26□□□□□ -1.09
LINC01539-201ENST00000587904 ZNF735P0CB33 412 aa8.26□□□□□ -1.09
LINC01539-201ENST00000587904 PMS2P11Q13670 270 aa8.26□□□□□ -1.09
LINC01539-201ENST00000587904 ARL6IP1Q15041 203 aa8.26□□□□□ -1.09
LINC01539-201ENST00000587904 C3AR1Q16581 482 aa8.26□□□□□ -1.09
LINC01539-201ENST00000587904 ZNF260Q3ZCT1 412 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms