RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 H1FXQ92522 213 aaKnown RBP4.59□□□□□ -1.67
CDH8-213ENST00000584966 SLC25A38Q96DW6 304 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 DNHD1Q96M86 4753 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 WDFY2Q96P53 400 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 BCL7BQ9BQE9 202 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 FAAP24Q9BTP7 215 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 TMEM59Q9BXS4 323 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 CST11Q9H112 138 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 LINC00574Q9H8X3 128 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 KIF25Q9UIL4 384 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 KCNS2Q9ULS6 477 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 HSF4Q9ULV5 492 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 SPATA2Q9UM82 520 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 PEX16Q9Y5Y5 336 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 SOX21Q9Y651 276 aaPredicted RBP4.59□□□□□ -1.67
CDH8-213ENST00000584966 KPTNQ9Y664 436 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 AUP1Q9Y679 476 aa4.59□□□□□ -1.67
CDH8-213ENST00000584966 TENM1Q9UKZ4 2725 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 TRAV39A0A0B4J263 110 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 MCRIP1C9JLW8 97 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 NPIPB11E5RHQ5 1161 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 RNASEK-C17orf49H0YIS7 233 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 H3BMQ9 156 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 C15orf65H3BRN8 121 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 M0R1W7 72 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 MFNGO00587 321 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 HSPB6O14558 160 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 CRLF1O75462 422 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 NAPSAO96009 420 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 ZNF728P0DKX0 622 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 PRTN3P24158 256 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 BLVRBP30043 206 aaPredicted RBP4.58□□□□□ -1.68
CDH8-213ENST00000584966 VEGFCP49767 419 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 EDDM3BP56851 147 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 EDDM3AQ14507 147 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 LDLRAD2Q5SZI1 272 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 ATAD3CQ5T2N8 411 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 FAM53AQ6NSI3 398 aaPredicted RBP4.58□□□□□ -1.68
CDH8-213ENST00000584966 BTNL3Q6UXE8 466 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 Q6ZRM9 215 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 Q6ZTK2 550 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 USP43Q70EL4 1123 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 GDPD3Q7L5L3 318 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 VMO1Q7Z5L0 202 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 CROCCP3Q8IVE0 287 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 FAM185AQ8N0U4 392 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 OR13A1Q8NGR1 328 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 OR10R2Q8NGX6 335 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 MRPL30Q8TCC3 161 aaKnown RBP4.58□□□□□ -1.68
CDH8-213ENST00000584966 LGALS14Q8TCE9 139 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 RAB2BQ8WUD1 216 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 ISOC1Q96CN7 298 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 ARHGAP5-AS1Q96IT6 56 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 URM1Q9BTM9 101 aaKnown RBP4.58□□□□□ -1.68
CDH8-213ENST00000584966 PECRQ9BY49 303 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 DCSTAMPQ9H295 470 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 SPACA1Q9HBV2 294 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.58□□□□□ -1.68
CDH8-213ENST00000584966 ABRACLQ9P1F3 81 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 AK3Q9UIJ7 227 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 ELF5Q9UKW6 265 aaPredicted RBP4.58□□□□□ -1.68
CDH8-213ENST00000584966 UBE2J1Q9Y385 318 aaPredicted RBP4.58□□□□□ -1.68
CDH8-213ENST00000584966 LINC00312Q9Y6C7 94 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 C2CD3Q4AC94 2353 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 ATRQ13535 2644 aa4.58□□□□□ -1.68
CDH8-213ENST00000584966 TRRAPQ9Y4A5 3859 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 MEIKINA0A087WXM9 373 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 TRBV6-6A0A0A6YYG2 114 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 KBTBD11-OT1A0A1B0GTJ5 212 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 A0A1W2PQ09 198 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 hADV38S2A0JD32 116 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 TMEM30CPA0ZSE6 113 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 DPPA5A6NC42 116 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 ZNF729A6NN14 1252 aaPredicted RBP4.57□□□□□ -1.68
CDH8-213ENST00000584966 MARCH11A6NNE9 402 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 CA11O75493 328 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 RBP4P02753 201 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 IGHV1-8P0DP01 117 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 GNB3P16520 340 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 ZNF182P17025 639 aaPredicted RBP4.57□□□□□ -1.68
CDH8-213ENST00000584966 RCC1P18754 421 aaPredicted RBP4.57□□□□□ -1.68
CDH8-213ENST00000584966 RORCP51449 518 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 KLRD1Q13241 179 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 DYNC1I2Q13409 638 aaKnown RBP4.57□□□□□ -1.68
CDH8-213ENST00000584966 RBM39Q14498 530 aaKnown RBP4.57□□□□□ -1.68
CDH8-213ENST00000584966 ZNF260Q3ZCT1 412 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 METTL11BQ5VVY1 283 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 MZT2BQ6NZ67 158 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 HEPN1Q6WQI6 88 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 Q6ZSN1 163 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 C9orf139Q6ZV77 190 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 PNKDQ8N490 385 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 OR56B1Q8NGI3 324 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 OR4K15Q8NH41 348 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 CCDC107Q8WV48 283 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 ZNF48Q96MX3 618 aaPredicted RBP4.57□□□□□ -1.68
CDH8-213ENST00000584966 ZNF714Q96N38 554 aa4.57□□□□□ -1.68
CDH8-213ENST00000584966 HDHD3Q9BSH5 251 aaPredicted RBP4.57□□□□□ -1.68
CDH8-213ENST00000584966 PCGF1Q9BSM1 259 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms