RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	ZNF555	Q8NEP9	628 aa		11.81	□□□□□ -0.52
SREBF1-222	ENST00000583732	SPACA1	Q9HBV2	294 aa		11.81	□□□□□ -0.52
SREBF1-222	ENST00000583732	RAB9B	Q9NP90	201 aa		11.81	□□□□□ -0.52
SREBF1-222	ENST00000583732	PARP11	Q9NR21	331 aa		11.81	□□□□□ -0.52
SREBF1-222	ENST00000583732	CKLF	Q9UBR5	152 aa		11.81	□□□□□ -0.52
SREBF1-222	ENST00000583732	CLEC2D	Q9UHP7	191 aa		11.81	□□□□□ -0.52
SREBF1-222	ENST00000583732	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.81	□□□□□ -0.52
SREBF1-222	ENST00000583732	PEX16	Q9Y5Y5	336 aa		11.81	□□□□□ -0.52
SREBF1-222	ENST00000583732	TENM3	Q9P273	2699 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	TRBV5-5	A0A0J9YX44	114 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	UBE2QL1	A1L167	161 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732		G3V318	75 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	MYL12A	P19105	171 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	DCK	P27707	260 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	ZNF137P	P52743	207 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	FHL3	Q13643	280 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	GPR176	Q14439	515 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	OR52L2P	Q8NGH6	319 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	GHSR	Q92847	366 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	OR14A2	Q96R54	314 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	SELENOI	Q9C0D9	397 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	KLK15	Q9H2R5	256 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	TAF9B	Q9HBM6	251 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	BABAM2	Q9NXR7	383 aa		11.8	□□□□□ -0.52
SREBF1-222	ENST00000583732	ATP6V0E1	O15342	81 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	CRTAP	O75718	401 aa	Predicted RBP	11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	MAS1	P04201	325 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	IGF1	P05019	195 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	OR5H8	P0DN80	308 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	PPP1CC	P36873	323 aa	Known RBP	11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	ACTB	P60709	375 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	GNB1	P62873	340 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	TMEM30B	Q3MIR4	351 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732		Q499Y3	187 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	ASPHD1	Q5U4P2	390 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	DMKN	Q6E0U4	476 aa	Predicted RBP	11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	TMEM65	Q6PI78	240 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	OR1N2	Q8NGR9	330 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	RITA1	Q96K30	269 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	ABHD14A	Q9BUJ0	271 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	MRPL20	Q9BYC9	149 aa	Known RBP	11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	S100A14	Q9HCY8	104 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	OR2S2	Q9NQN1	319 aa		11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.79	□□□□□ -0.52
SREBF1-222	ENST00000583732	LANCL1	O43813	399 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	MGMT	P16455	207 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	FST	P19883	344 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	RPS11	P62280	158 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	YIF1B	Q5BJH7	314 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	TRAT1	Q6PIZ9	186 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	PQLC1	Q8N2U9	271 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	ZNF491	Q8N8L2	437 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	MYOZ3	Q8TDC0	251 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	FAM46B	Q96A09	425 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	PGLYRP3	Q96LB9	341 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	ZNF251	Q9BRH9	671 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	ISYNA1	Q9NPH2	558 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	SMPD3	Q9NY59	655 aa	Predicted RBP	11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	DIMT1	Q9UNQ2	313 aa	Known RBP	11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	VSIG4	Q9Y279	399 aa		11.78	□□□□□ -0.52
SREBF1-222	ENST00000583732	TRBV5-7	A0A0A0MS05	114 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	TRAV41	A0A0B4J266	112 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	IRGM	A1A4Y4	181 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	GPX5	O75715	221 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	BAG2	O95816	211 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	OR8U8	P0C7N1	319 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	BLVRB	P30043	206 aa	Predicted RBP	11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	PPIF	P30405	207 aa	Known RBP	11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	OR3A3	P47888	321 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	ZNF616	Q08AN1	781 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	ECSCR	Q19T08	205 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	MORN2	Q502X0	79 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	GAPT	Q8N292	157 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	MRPS24	Q96EL2	167 aa	Known RBP	11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	TMEM80	Q96HE8	168 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	UBE2E2	Q96LR5	201 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	NABP2	Q9BQ15	211 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	ANKRD60	Q9BZ19	345 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	ALX4	Q9H161	411 aa	Predicted RBP	11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	OR51J1	Q9H342	316 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	CHCHD3	Q9NX63	227 aa	Known RBP	11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	KCNIP1	Q9NZI2	227 aa		11.77	□□□□□ -0.53
SREBF1-222	ENST00000583732	IGHV7-81	A0A0B4J1V7	117 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732		I3L521	148 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	NBR2	O15453	112 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	HLA-DRB1	P01911	266 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	FUT3	P21217	361 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	KIAA0141	Q14154	515 aa	Predicted RBP	11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	SIGIRR	Q6IA17	410 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	ODF3L1	Q8IXM7	274 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	MRPL30	Q8TCC3	161 aa	Known RBP	11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	CASTOR1	Q8WTX7	329 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	CYGB	Q8WWM9	190 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	DCUN1D4	Q92564	292 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732		Q96M66	194 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	RDH12	Q96NR8	316 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	ZNF580	Q9UK33	172 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	JPT1	Q9UK76	154 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	SMAD5-AS1	Q9Y6J3	95 aa		11.76	□□□□□ -0.53
SREBF1-222	ENST00000583732	A3GALT2	U3KPV4	340 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms