RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 TGIF2LXQ8IUE1 241 aa16.8■□□□□ 0.28
CSNK1D-216ENST00000581108 Q8N9W7 124 aa16.8■□□□□ 0.28
CSNK1D-216ENST00000581108 CST11Q9H112 138 aa16.8■□□□□ 0.28
CSNK1D-216ENST00000581108 PLSCR3Q9NRY6 295 aa16.8■□□□□ 0.28
CSNK1D-216ENST00000581108 MBNL3Q9NUK0 354 aaKnown RBP16.8■□□□□ 0.28
CSNK1D-216ENST00000581108 MOSP00540 346 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 ZNF137PP52743 207 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 SLC35A2P78381 396 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 MED22Q15528 200 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 MORN2Q502X0 79 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 NKAPLQ5M9Q1 402 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 RBM48Q5RL73 367 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 C18orf65Q6ZTR6 163 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 CEACAM19Q7Z692 300 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 FOXRED2Q8IWF2 684 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 STPG2Q8N412 459 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 OR52L2PQ8NGH6 319 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 MRPL30Q8TCC3 161 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 NRG4Q8WWG1 115 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 OR2S2Q9NQN1 319 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 SCN3BQ9NY72 215 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 KCNIP1Q9NZI2 227 aa16.79■□□□□ 0.28
CSNK1D-216ENST00000581108 VSIG8P0DPA2 414 aa16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 SRMP19623 302 aa16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 GPR12P47775 334 aa16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 RPL23AP62750 156 aaKnown RBP16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 GNMTQ14749 295 aa16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 C1orf100Q5SVJ3 147 aa16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 STEAP3Q658P3 488 aa16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 GLT8D1Q68CQ7 371 aa16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 OR2W3Q7Z3T1 314 aa16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 PHYHIPQ92561 330 aa16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 ABCG5Q9H222 651 aa16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 LIN7CQ9NUP9 197 aaKnown RBP16.78■□□□□ 0.28
CSNK1D-216ENST00000581108 TXNL1O43396 289 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 UBBP0CG47 229 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 AQP4P55087 323 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 SLC35B1P78383 322 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 IRF3Q14653 427 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 ETV3LQ6ZN32 361 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 MRPL41Q8IXM3 137 aaKnown RBP16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 LINC00482Q8N8I6 264 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 RCC1LQ96I51 464 aaKnown RBP16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 S1PR3Q99500 378 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 SULT4A1Q9BR01 284 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 FAAP24Q9BTP7 215 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 KCNK15Q9H427 330 aa16.77■□□□□ 0.28
CSNK1D-216ENST00000581108 CHATP28329 748 aa16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 HTR2CP28335 458 aa16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 PPP1CCP36873 323 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 F2RL1P55085 397 aa16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 RPS27AP62979 156 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 HSD17B12Q53GQ0 312 aa16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 LIPKQ5VXJ0 399 aa16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 C8orf86Q6ZUL3 223 aa16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 TMEM203Q969S6 136 aa16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 NEDD4LQ96PU5 975 aa16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 RASL11BQ9BPW5 248 aa16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 ZFP57Q9NU63 452 aa16.76■□□□□ 0.27
CSNK1D-216ENST00000581108 AP4M1O00189 453 aa16.75■□□□□ 0.27
CSNK1D-216ENST00000581108 CD37P11049 281 aa16.75■□□□□ 0.27
CSNK1D-216ENST00000581108 THBS3P49746 956 aa16.75■□□□□ 0.27
CSNK1D-216ENST00000581108 UNC119Q13432 240 aa16.75■□□□□ 0.27
CSNK1D-216ENST00000581108 C6orf201Q7Z4U5 140 aa16.75■□□□□ 0.27
CSNK1D-216ENST00000581108 ZNF554Q86TJ5 538 aa16.75■□□□□ 0.27
CSNK1D-216ENST00000581108 COMMD1Q8N668 190 aa16.75■□□□□ 0.27
CSNK1D-216ENST00000581108 OR51D1Q8NGF3 324 aa16.75■□□□□ 0.27
CSNK1D-216ENST00000581108 NICN1Q9BSH3 213 aa16.75■□□□□ 0.27
CSNK1D-216ENST00000581108 TMEM59Q9BXS4 323 aa16.75■□□□□ 0.27
CSNK1D-216ENST00000581108 NUDT19A8MXV4 375 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 SLC22A1O15245 554 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 LANCL1O43813 399 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 UCHL1P09936 223 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 HTD2P86397 168 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 PNLIPRP3Q17RR3 467 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 ODF3L1Q8IXM7 274 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 FAM71E2Q8N5Q1 922 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 KLHL30-AS1Q8NEE0 82 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 OR8H1Q8NGG4 311 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 KCNG3Q8TAE7 436 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 GALMQ96C23 342 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 HSPB9Q9BQS6 159 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 ABHD14AQ9BUJ0 271 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 DUSP21Q9H596 190 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 JPT1Q9UK76 154 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 TPRKBQ9Y3C4 175 aa16.74■□□□□ 0.27
CSNK1D-216ENST00000581108 YPEL1O60688 119 aa16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 DUS4LO95620 317 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 KRTAP10-11P60412 298 aa16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 QRFPP83859 136 aa16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 LSAMPQ13449 338 aa16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 TEX38Q6PEX7 206 aa16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 TMEM91Q6ZNR0 172 aa16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 LCNL1Q6ZST4 164 aa16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 UFD1Q92890 307 aa16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 YPEL2Q96QA6 119 aa16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 TM2D1Q9BX74 207 aa16.73■□□□□ 0.27
CSNK1D-216ENST00000581108 TMEM14DPA8MWL7 114 aa16.72■□□□□ 0.27
CSNK1D-216ENST00000581108 RPLP1P05386 114 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-216ENST00000581108 HSMCR30P0CW71 290 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms