RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SLC16A12Q6ZSM3 486 aa10.05□□□□□ -0.8
CDK5RAP3-213ENST00000579605 SYS1Q8N2H4 156 aa10.05□□□□□ -0.8
CDK5RAP3-213ENST00000579605 OR10A7Q8NGE5 316 aa10.05□□□□□ -0.8
CDK5RAP3-213ENST00000579605 PYDC1Q8WXC3 89 aa10.05□□□□□ -0.8
CDK5RAP3-213ENST00000579605 PDCD1LG2Q9BQ51 273 aa10.05□□□□□ -0.8
CDK5RAP3-213ENST00000579605 KRTAP4-5Q9BYR2 181 aa10.05□□□□□ -0.8
CDK5RAP3-213ENST00000579605 LINC00574Q9H8X3 128 aa10.05□□□□□ -0.8
CDK5RAP3-213ENST00000579605 ISG20L2Q9H9L3 353 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-213ENST00000579605 AASSQ9UDR5 926 aa10.05□□□□□ -0.8
CDK5RAP3-213ENST00000579605 A0A1W2PN81 502 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 NPIPB11E5RHQ5 1161 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 GABRPO00591 440 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 RGS11O94810 467 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 HTR3BO95264 441 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 CNIH1O95406 144 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 FADS2O95864 444 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 SSTR5P35346 364 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 CHRNA7P36544 502 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 ALDH3A2P51648 485 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 RSU1Q15404 277 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 ECSCRQ19T08 205 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 PIGYQ3MUY2 71 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 RSBN1Q5VWQ0 802 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 TMEM104Q8NE00 496 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 OR8H1Q8NGG4 311 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 OR10K1Q8NGX5 313 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 Q96MT0 163 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 FAM53CQ9NYF3 392 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 ZNF580Q9UK33 172 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 GMPPBQ9Y5P6 360 aa10.04□□□□□ -0.8
CDK5RAP3-213ENST00000579605 SHISA3A0PJX4 238 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 E9PI62 339 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 DYNC1I1O14576 645 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 BLVRBP30043 206 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 SOX2P48431 317 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 PLPPR1Q8TBJ4 325 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 RTN4IP1Q8WWV3 396 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 MS4A10Q96PG2 267 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 DPCDQ9BVM2 203 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 FAM118AQ9NWS6 357 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 ERVK13-1Q9NX77 482 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 TAS2R4Q9NYW5 299 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 SIGLEC8Q9NYZ4 499 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 ING4Q9UNL4 249 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 KLK5Q9Y337 293 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 A3GALT2U3KPV4 340 aa10.03□□□□□ -0.8
CDK5RAP3-213ENST00000579605 TMEM30CPA0ZSE6 113 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 IZUMO1RA6ND01 250 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 SOX15O60248 233 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 OR7C1O76099 320 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 MED14OSP0DP75 135 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 GABRB1P18505 474 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 GZMHP20718 246 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 PAX5Q02548 391 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 RAB40BQ12829 278 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 MMDQ15546 238 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ZNF529Q6P280 563 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 CBR4Q8N4T8 237 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 DEFB125Q8N687 156 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 SUMF2Q8NBJ7 301 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 MINDY2Q8NBR6 621 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 OR51A2Q8NGJ7 313 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 RGP1Q92546 391 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 THAP7Q9BT49 309 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 JAM3Q9BX67 310 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 METTL9Q9H1A3 318 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 AMBNQ9NP70 447 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ST3GAL6Q9Y274 331 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 VPS13DQ5THJ4 4388 aa10.02□□□□□ -0.81
CDK5RAP3-213ENST00000579605 IGHV7-81A0A0B4J1V7 117 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 TPPPO94811 219 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 CDRT1O95170 752 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 CSTBP04080 98 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 CD2P06729 351 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 IL3RAP26951 378 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 CD81P60033 236 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 PPP3R1P63098 170 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 EWSR1Q01844 656 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ASCL4Q6XD76 172 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 OR52I1Q8NGK6 324 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 OR52N1Q8NH53 320 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 UBALD1Q8TB05 177 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 GPR148Q8TDV2 347 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ARL11Q969Q4 196 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 S100A13Q99584 98 aa10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 RPL36Q9Y3U8 105 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-213ENST00000579605 SDCBPO00560 298 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 GTF2A1P52655 376 aaPredicted RBP10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 RBM11P57052 281 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ATAD3CQ5T2N8 411 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 LGALS9CQ6DKI2 356 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 LCN12Q6JVE5 192 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 ZFP1Q6P2D0 407 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 LINC00596Q86U02 117 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 OR52M1Q8NGK5 317 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 RHOXF1Q8NHV9 184 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 NEK7Q8TDX7 302 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 CCDC107Q8WV48 283 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 RITA1Q96K30 269 aa10□□□□□ -0.81
CDK5RAP3-213ENST00000579605 NEURL2Q9BR09 285 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms