RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 MOB3BQ86TA1 216 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 DTX3Q8N9I9 347 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 OR52L2PQ8NGH6 319 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 SGMS2Q8NHU3 365 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 ARHGAP5-AS1Q96IT6 56 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 HDHD3Q9BSH5 251 aaPredicted RBP15.65■□□□□ 0.1
SS18-209ENST00000578595 PRSS22Q9GZN4 317 aa15.65■□□□□ 0.1
SS18-209ENST00000578595 MBNL3Q9NUK0 354 aaKnown RBP15.65■□□□□ 0.1
SS18-209ENST00000578595 LY6LH3BQJ8 138 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 SLC31A2O15432 143 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 LPLP06858 475 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 VSIG10L2P0DP72 767 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 PPP1CCP36873 323 aaKnown RBP15.64■□□□□ 0.09
SS18-209ENST00000578595 PROK1P58294 105 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 HABP2Q14520 560 aaPredicted RBP15.64■□□□□ 0.09
SS18-209ENST00000578595 GNMTQ14749 295 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 MOB1BQ7L9L4 216 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 C5orf24Q7Z6I8 188 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 DRAM1Q8N682 238 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 GALMQ96C23 342 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 CMSS1Q9BQ75 279 aaKnown RBP15.64■□□□□ 0.09
SS18-209ENST00000578595 OCSTAMPQ9BR26 566 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 PECRQ9BY49 303 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 C12orf4Q9NQ89 552 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 FBLN5Q9UBX5 448 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 DAPK2Q9UIK4 370 aa15.64■□□□□ 0.09
SS18-209ENST00000578595 NOTOA8MTQ0 251 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 GAPDHP04406 335 aaKnown RBP15.63■□□□□ 0.09
SS18-209ENST00000578595 SNRNP70P08621 437 aaKnown RBP15.63■□□□□ 0.09
SS18-209ENST00000578595 FAM106CPP0CH98 169 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 SDC2P34741 201 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 KIR2DS4P43632 304 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 EFNB2P52799 333 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 ZNF554Q86TJ5 538 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 OR8H3Q8N146 312 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 LYG1Q8N1E2 194 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 FAM89BQ8N5H3 189 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 RAB3CQ96E17 227 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 ATG5Q9H1Y0 275 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 RIMS4Q9H426 269 aaPredicted RBP15.63■□□□□ 0.09
SS18-209ENST00000578595 RNF167Q9H6Y7 350 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 JPT1Q9UK76 154 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 FBN3Q75N90 2809 aa15.63■□□□□ 0.09
SS18-209ENST00000578595 IGHV3-72A0A0B4J1Y9 119 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 A0A1W2PPI3 338 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 METTL21EPA6NDL7 271 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 LDLRAD4O15165 306 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 RGS11O94810 467 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 CD3GP09693 182 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 TMEM11P17152 192 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 HNF4GQ14541 408 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 HMGN3Q15651 99 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 TIMM50Q3ZCQ8 353 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 Q3ZCU0 254 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 C9orf152Q5JTZ5 239 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 C16orf82Q7Z2V1 217 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 TPRA1Q86W33 373 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 NR2C2APQ86WQ0 139 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 LINC00311Q8N616 119 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 KLHDC1Q8N7A1 406 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 ZNF702PQ9H963 129 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 HSF4Q9ULV5 492 aa15.62■□□□□ 0.09
SS18-209ENST00000578595 NBEAL1Q6ZS30 2694 aa15.61■□□□□ 0.09
SS18-209ENST00000578595 WNK1Q9H4A3 2382 aa15.61■□□□□ 0.09
SS18-209ENST00000578595 HSPA12AO43301 675 aa15.61■□□□□ 0.09
SS18-209ENST00000578595 NAPSAO96009 420 aa15.61■□□□□ 0.09
SS18-209ENST00000578595 RAB6AP20340 208 aa15.61■□□□□ 0.09
SS18-209ENST00000578595 VDAC2P45880 294 aaPredicted RBP15.61■□□□□ 0.09
SS18-209ENST00000578595 SFXN4Q6P4A7 337 aa15.61■□□□□ 0.09
SS18-209ENST00000578595 TGIF2LXQ8IUE1 241 aa15.61■□□□□ 0.09
SS18-209ENST00000578595 C11orf44Q8N8P7 122 aa15.61■□□□□ 0.09
SS18-209ENST00000578595 CENPOQ9BU64 300 aa15.61■□□□□ 0.09
SS18-209ENST00000578595 ABHD14AQ9BUJ0 271 aa15.61■□□□□ 0.09
SS18-209ENST00000578595 IGHV1-3A0A0C4DH29 117 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 OR2F2O95006 317 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 IGKV1D-33P01593 117 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 IGKV1-33P01594 117 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 CLEC2LP0C7M8 214 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 SNRPBP14678 240 aaKnown RBP15.6■□□□□ 0.09
SS18-209ENST00000578595 TMEM50BP56557 158 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 KRTAP10-3P60369 221 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 BLCAPP62952 87 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 HLA-DRB3P79483 266 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 ZNF816Q0VGE8 651 aaPredicted RBP15.6■□□□□ 0.09
SS18-209ENST00000578595 TMEM95Q3KNT9 176 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 MOGAT2Q3SYC2 334 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 ABCA11PQ4W5N1 156 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 MORN2Q502X0 79 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 FBLN7Q53RD9 439 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 CT45A1Q5HYN5 189 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 PLAC9Q5JTB6 97 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 C11orf88Q6PI97 169 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 SLC25A48Q6ZT89 311 aaKnown RBP15.6■□□□□ 0.09
SS18-209ENST00000578595 C8orf31Q8N9H6 132 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 OR2AK2Q8NG84 335 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 OR10R2Q8NGX6 335 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 CT45A3Q8NHU0 189 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 RBM14Q96PK6 669 aaKnown RBP15.6■□□□□ 0.09
SS18-209ENST00000578595 SLC23A1Q9UHI7 598 aa15.6■□□□□ 0.09
SS18-209ENST00000578595 MGAT4AQ9UM21 535 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms