RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 TAGLN2P37802 199 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 RPL8P62917 257 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 RAE1P78406 368 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 HLA-DRB3P79483 266 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SMN1Q16637 294 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SOHLH1Q5JUK2 328 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 CCBE1Q6UXH8 406 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 C16orf82Q7Z2V1 217 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 PPP1R27Q86WC6 154 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 TPRX1Q8N7U7 411 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 BVESQ8NE79 360 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 CXorf58Q96LI9 332 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 NRTNQ99748 197 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 CTDSP1Q9GZU7 261 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 G6PC2Q9NQR9 355 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 C20orf141Q9NUB4 165 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 KLF2Q9Y5W3 355 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 KPTNQ9Y664 436 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF407Q9C0G0 2248 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 MYH15Q9Y2K3 1946 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 TRGV2A0A075B6R0 118 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 IGKV3D-15A0A087WSY6 115 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A0B4J2A0 478 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 C7orf72A4D263 438 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 PGPA6NDG6 321 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 IGKV3-15P01624 115 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 IFI6P09912 130 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 HIST1H1DP16402 221 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 KLF9Q13886 244 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SRSF7Q16629 238 aaKnown RBP eCLIP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 ATP6V1FQ16864 119 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 C6orf201Q7Z4U5 140 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 LYG2Q86SG7 212 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 NANOGP1Q8N7R0 232 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 C5orf17Q8NAS9 161 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 LFNGQ8NES3 379 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 OR4X1Q8NH49 305 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM18Q96B42 140 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 TVP23CQ96ET8 276 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 ARHGAP5-AS1Q96IT6 56 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 EAF1Q96JC9 268 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SRRQ9GZT4 340 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 ADGRL4Q9HBW9 690 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 Q9N2K0 584 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 NPAP1Q9NZP6 1156 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SEMA5BQ9P283 1151 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SHPKQ9UHJ6 478 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 HIGD1AQ9Y241 93 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 EXOGQ9Y2C4 368 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 KCNK7Q9Y2U2 307 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A1B0GUL6 1792 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 CHD8Q9HCK8 2581 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 PCNX2A6NKB5 2137 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 IGLV3-12A0A075B6K2 115 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 CXorf65A6NEN9 183 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 DHRS7CA6NNS2 312 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZAR1LA6NP61 321 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF705FA8MVS1 300 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ADAM11O75078 769 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 HYPMO75409 117 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 HPRT1P00492 218 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF705DP0CH99 300 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF705BP0CI00 300 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 HRH1P35367 487 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 POLR2IP36954 125 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ERVK11-1P61568 191 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 UBE2L3P68036 154 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 SSBP1Q04837 148 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF362Q5T0B9 420 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 LCN15Q6UWW0 184 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RNF165Q6ZSG1 346 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 KCNRGQ8N5I3 272 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 DRAXINQ8NBI3 349 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 OR4P4Q8NGL7 312 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 RNF133Q8WVZ7 376 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ADIPOR1Q96A54 375 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 REG4Q9BYZ8 158 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 HRH4Q9H3N8 390 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 SLC25A37Q9NYZ2 338 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 TECRQ9NZ01 308 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 DTX4Q9Y2E6 619 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 YTHDF2Q9Y5A9 579 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 NAV3Q8IVL0 2385 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ARPC4-TTLL3A0A0A6YYG9 625 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHV3-21A0A0B4J1V1 117 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 H3BP45 60 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 J3QLI3 93 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 TM4SF5O14894 197 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 MPDU1O75352 247 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 MOSP00540 346 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 FUCA1P04066 466 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 MSMBP08118 114 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 MGPP08493 103 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF735P0CB33 412 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 CRISP2P16562 243 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 PI3P19957 117 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHV1-2P23083 117 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 G0S2P27469 103 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 PTGDSP41222 190 aa2.51□□□□□ -2.01
SMCHD1-203ENST00000577880 CCR6P51684 374 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms