RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 ZNF850A8MQ14 1090 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 WDR1O75083 606 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 DFFBO76075 338 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 SFT2D2O95562 160 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 SEC11BP0C7V7 166 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 TBPP20226 339 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 LMO1P25800 156 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 CAMLGP49069 296 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 UBE2NP61088 152 aaKnown RBP11.78□□□□□ -0.52
RNF43-202ENST00000577625 KRTCAP3Q53RY4 240 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 RPRMLQ8N4K4 120 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 Q8NA96 180 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 POC1AQ8NBT0 407 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 RAB39BQ96DA2 213 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 BOD1Q96IK1 185 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 PARP12Q9H0J9 701 aaKnown RBP11.78□□□□□ -0.52
RNF43-202ENST00000577625 IL36GQ9NZH8 169 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 FBXL17Q9UF56 701 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 MEMO1Q9Y316 297 aa11.78□□□□□ -0.52
RNF43-202ENST00000577625 STRAPQ9Y3F4 350 aaKnown RBP11.78□□□□□ -0.52
RNF43-202ENST00000577625 CHD8Q9HCK8 2581 aa11.77□□□□□ -0.52
RNF43-202ENST00000577625 HEATR1Q9H583 2144 aaKnown RBP11.77□□□□□ -0.52
RNF43-202ENST00000577625 SERPINE3A8MV23 424 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 J3QW42 95 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 IFNA6P05013 189 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 RPL12P30050 165 aaKnown RBP11.77□□□□□ -0.53
RNF43-202ENST00000577625 NPY4RP50391 375 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 S100A10P60903 97 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 IL15RAQ13261 267 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 C1orf185Q5T7R7 199 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 TMEM183AQ8IXX5 376 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 C1orf162Q8NEQ5 155 aaPredicted RBP11.77□□□□□ -0.53
RNF43-202ENST00000577625 OR5L1Q8NGL2 311 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 PECRQ9BY49 303 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 ARV1Q9H2C2 271 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 PROCRQ9UNN8 238 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 NCOR2Q9Y618 2525 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 FIGNL2A6NMB9 653 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 H3BQ15 152 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 K7EPK0 472 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 DLL1O00548 723 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 CA11O75493 328 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 RPLP1P05386 114 aaKnown RBP11.77□□□□□ -0.53
RNF43-202ENST00000577625 OR5AC1P0C628 307 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 PTGER4P35408 488 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 IDH3GP51553 393 aaPredicted RBP11.77□□□□□ -0.53
RNF43-202ENST00000577625 UBE2KP61086 200 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 PRDX4Q13162 271 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 TBC1D28Q2M2D7 210 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 AARDQ4LEZ3 155 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 MRPL52Q86TS9 123 aaKnown RBP11.77□□□□□ -0.53
RNF43-202ENST00000577625 HOGA1Q86XE5 327 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 THNSL2Q86YJ6 484 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 FAM71E2Q8N5Q1 922 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 CYYR1Q96J86 154 aa11.77□□□□□ -0.53
RNF43-202ENST00000577625 ZNF71Q9NQZ8 489 aaPredicted RBP11.77□□□□□ -0.53
RNF43-202ENST00000577625 SPTA1P02549 2419 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 IGKV1-12A0A0C4DH73 117 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 IGKV1D-12P01611 117 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 EPHA1P21709 976 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 FCGR2CP31995 323 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 HRH1P35367 487 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 ARFRP1Q13795 201 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 ZDHHC23Q8IYP9 409 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 WDR31Q8NA23 367 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 FAM57AQ8TBR7 257 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 MARCH1Q8TCQ1 289 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 OR10C1Q96KK4 312 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 OR51B6Q9H340 312 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 METTL8Q9H825 291 aaKnown RBP11.76□□□□□ -0.53
RNF43-202ENST00000577625 URGCP-MRPS24S4R325 110 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 PCNX1Q96RV3 2341 aa11.76□□□□□ -0.53
RNF43-202ENST00000577625 CD300LBA8K4G0 201 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 ZNF705GA8MUZ8 300 aaPredicted RBP11.75□□□□□ -0.53
RNF43-202ENST00000577625 GLIPR1P48060 266 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 TMPRSS3P57727 454 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 ERVFC1-1P60608 527 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 CEACAM21Q3KPI0 293 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 CLEC18BQ6UXF7 455 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 CXorf67Q86X51 503 aaPredicted RBP11.75□□□□□ -0.53
RNF43-202ENST00000577625 CALHM1Q8IU99 346 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 FGF23Q9GZV9 251 aaPredicted RBP11.75□□□□□ -0.53
RNF43-202ENST00000577625 RAXQ9Y2V3 346 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 AMBPP02760 352 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 TMEM33P57088 247 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 MRPL49Q13405 166 aaKnown RBP11.75□□□□□ -0.53
RNF43-202ENST00000577625 SLC9A3R2Q15599 337 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 FOXRED2Q8IWF2 684 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 ZNF611Q8N823 705 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 OR4K15Q8NH41 348 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 FAM210BQ96KR6 192 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 HSF4Q9ULV5 492 aa11.75□□□□□ -0.53
RNF43-202ENST00000577625 SMPD2O60906 423 aa11.74□□□□□ -0.53
RNF43-202ENST00000577625 HOXC12P31275 282 aa11.74□□□□□ -0.53
RNF43-202ENST00000577625 TIMP3P35625 211 aa11.74□□□□□ -0.53
RNF43-202ENST00000577625 VAX1Q5SQQ9 334 aa11.74□□□□□ -0.53
RNF43-202ENST00000577625 FAM219AQ8IW50 185 aa11.74□□□□□ -0.53
RNF43-202ENST00000577625 OSR2Q8N2R0 312 aa11.74□□□□□ -0.53
RNF43-202ENST00000577625 CISD2Q8N5K1 135 aaKnown RBP11.74□□□□□ -0.53
RNF43-202ENST00000577625 PLEKHA2Q9HB19 425 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms