RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ISYNA1Q9NPH2 558 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 VWFP04275 2813 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 CMYA5Q8N3K9 4069 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 RGS11O94810 467 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 BPNT1O95861 308 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 ARSBP15848 533 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 CD33P20138 364 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 CRHBPP24387 322 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 RANBP1P43487 201 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 GP2P55259 537 aaKnown RBP12.32□□□□□ -0.44
SF3B3-215ENST00000577085 MLLT11Q13015 90 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-215ENST00000577085 TPBGQ13641 420 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 SIGIRRQ6IA17 410 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 SLC25A48Q6ZT89 311 aaKnown RBP12.32□□□□□ -0.44
SF3B3-215ENST00000577085 SLC35E3Q7Z769 313 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 ZNF554Q86TJ5 538 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 IZUMO1Q8IYV9 350 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 GAPTQ8N292 157 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 SETD6Q8TBK2 473 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 MRPL30Q8TCC3 161 aaKnown RBP12.32□□□□□ -0.44
SF3B3-215ENST00000577085 CHPT1Q8WUD6 406 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 EAF1Q96JC9 268 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-215ENST00000577085 URM1Q9BTM9 101 aaKnown RBP12.32□□□□□ -0.44
SF3B3-215ENST00000577085 FAAP24Q9BTP7 215 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 PLEKHJ1Q9NW61 149 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 LRRC42Q9Y546 428 aa12.32□□□□□ -0.44
SF3B3-215ENST00000577085 ADARB2-AS1A8MUL3 147 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 SLC22A1O15245 554 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 SLC31A2O15432 143 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 MOSP00540 346 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 CPEP16870 476 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 CALRP27797 417 aaKnown RBP12.31□□□□□ -0.44
SF3B3-215ENST00000577085 CHATP28329 748 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 CD1BP29016 333 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 BLVRBP30043 206 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-215ENST00000577085 RPS25P62851 125 aaKnown RBP12.31□□□□□ -0.44
SF3B3-215ENST00000577085 P2RY14Q15391 338 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 RAB11BQ15907 218 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 CT45A1Q5HYN5 189 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 STEAP3Q658P3 488 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 FAM53AQ6NSI3 398 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-215ENST00000577085 C6orf201Q7Z4U5 140 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 CT45A3Q8NHU0 189 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 MGLLQ99685 303 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 RASL11BQ9BPW5 248 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 SULT4A1Q9BR01 284 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 ABHD14AQ9BUJ0 271 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 MBNL3Q9NUK0 354 aaKnown RBP12.31□□□□□ -0.44
SF3B3-215ENST00000577085 STEAP1Q9UHE8 339 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 JPT1Q9UK76 154 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 WNK1Q9H4A3 2382 aa12.31□□□□□ -0.44
SF3B3-215ENST00000577085 MAP2K4P45985 399 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 ZNF134P52741 427 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 HTD2P86397 168 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 EBI3Q14213 229 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 MORN2Q502X0 79 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 SAMD5Q5TGI4 173 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 ZNF329Q86UD4 541 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 ZNF439Q8NDP4 499 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 OR2AK2Q8NG84 335 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 OR52L2PQ8NGH6 319 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 IL1F10Q8WWZ1 152 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 ST6GALNAC6Q969X2 333 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 NICN1Q9BSH3 213 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 KCNK15Q9H427 330 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 ACOT13Q9NPJ3 140 aa12.3□□□□□ -0.44
SF3B3-215ENST00000577085 AK6Q9Y3D8 172 aaKnown RBP12.3□□□□□ -0.44
SF3B3-215ENST00000577085 SLC17A2O00624 439 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 PPP1CCP36873 323 aaKnown RBP12.29□□□□□ -0.44
SF3B3-215ENST00000577085 PSMD7P51665 324 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 UNC119Q13432 240 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 GNMTQ14749 295 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 BEAN1Q3B7T3 259 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 OXLD1Q5BKU9 147 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 C10orf99Q6UWK7 81 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 TMEM91Q6ZNR0 172 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 ZNF367Q7RTV3 350 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 OR2W3Q7Z3T1 314 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 OR51D1Q8NGF3 324 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 OR8H1Q8NGG4 311 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 NOL4LQ96MY1 436 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-215ENST00000577085 TM2D1Q9BX74 207 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 GON7Q9BXV9 100 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 RIMS4Q9H426 269 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-215ENST00000577085 LIN7CQ9NUP9 197 aaKnown RBP12.29□□□□□ -0.44
SF3B3-215ENST00000577085 RAB26Q9ULW5 256 aa12.29□□□□□ -0.44
SF3B3-215ENST00000577085 TMEM14DPA8MWL7 114 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 NUDT19A8MXV4 375 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 AP4M1O00189 453 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 LANCL1O43813 399 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 RRP9O43818 475 aaKnown RBP12.28□□□□□ -0.44
SF3B3-215ENST00000577085 IGHG2P01859 326 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 ZNF137PP52743 207 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 FABP5Q01469 135 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 MOB1BQ7L9L4 216 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 REC114Q7Z4M0 266 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 COMMD1Q8N668 190 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 LINC00527Q9UJ94 153 aa12.28□□□□□ -0.44
SF3B3-215ENST00000577085 ZNF736B4DX44 427 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms