RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 NOTCH3Q9UM47 2321 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 MEIKINA0A087WXM9 373 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 KBTBD11-OT1A0A1B0GTJ5 212 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 A0A1W2PPI3 338 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 ZNF320A2RRD8 509 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 FUOMA2VDF0 154 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 PSMB11A5LHX3 300 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 ZNF729A6NN14 1252 aaPredicted RBP4.91□□□□□ -1.62
NUP88-212ENST00000576708 J3QR06 171 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 GABRPO00591 440 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 DYNC1I1O14576 645 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 CIB2O75838 187 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 CSN2P05814 226 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 DBTP11182 482 aaKnown RBP4.91□□□□□ -1.62
NUP88-212ENST00000576708 GABRB1P18505 474 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 SSTR5P35346 364 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 CEACAM3P40198 252 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 PRRX1P54821 245 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 PAN3Q58A45 887 aaKnown RBP4.91□□□□□ -1.62
NUP88-212ENST00000576708 SLC25A30Q5SVS4 291 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 SLC25A24Q6NUK1 477 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 C16orf82Q7Z2V1 217 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 CDH26Q8IXH8 852 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 IZUMO1Q8IYV9 350 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 SAXO1Q8IYX7 474 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 CBR4Q8N4T8 237 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 OR4X2Q8NGF9 303 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 OR51T1Q8NGJ9 327 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 OR52I1Q8NGK6 324 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 OR9G1Q8NH87 305 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 CNIH3Q8TBE1 160 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 MRGPRDQ8TDS7 321 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 TNFAIP8L1Q8WVP5 186 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 TSEN15Q8WW01 171 aaKnown RBP4.91□□□□□ -1.62
NUP88-212ENST00000576708 TRUB1Q8WWH5 349 aaKnown RBP4.91□□□□□ -1.62
NUP88-212ENST00000576708 TOMM40LQ969M1 308 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 RPEQ96AT9 228 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 ORAI1Q96D31 301 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 CYYR1Q96J86 154 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 DUX3Q96PT4 197 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 SLC29A1Q99808 456 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 TAS2R4Q9NYW5 299 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 CALYQ9NYX4 217 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 IDI2-AS1Q9NZ38 188 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 PSG11Q9UQ72 335 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 GMPPBQ9Y5P6 360 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 RYR3Q15413 4870 aa4.91□□□□□ -1.62
NUP88-212ENST00000576708 KMT2CQ8NEZ4 4911 aaKnown RBP4.91□□□□□ -1.62
NUP88-212ENST00000576708 IGHV3-72A0A0B4J1Y9 119 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM90A18PA6NE21 464 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM90A16PA6NEW6 464 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM90A20PA6NIJ5 464 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM90A9PA6NNJ1 464 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM90A12PA8MX19 464 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM90A5PA8MXJ8 464 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 NPIPB11E5RHQ5 1161 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 SULT1B1O43704 296 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 SLC25A17O43808 307 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 ATP5HO75947 161 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 CDRT1O95170 752 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 IGKV1D-33P01593 117 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 IGKV1-33P01594 117 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM90A15PP0C7V4 464 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM90A13PP0C7W8 464 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM90A14PP0C7W9 464 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM90A24PP0C7X0 464 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM106CPP0CH98 169 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 MNDAP41218 407 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 REG1BP48304 166 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 RASSF2P50749 326 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 GBX2P52951 348 aaPredicted RBP4.9□□□□□ -1.63
NUP88-212ENST00000576708 SLC35A2P78381 396 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 MRPS15P82914 257 aaKnown RBP4.9□□□□□ -1.63
NUP88-212ENST00000576708 RIPK1Q13546 671 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 HES1Q14469 280 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 SMN1Q16637 294 aaKnown RBP4.9□□□□□ -1.63
NUP88-212ENST00000576708 RSBN1Q5VWQ0 802 aaPredicted RBP4.9□□□□□ -1.63
NUP88-212ENST00000576708 MEDAGQ5VYS4 303 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 XAF1Q6GPH4 301 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 ELP2Q6IA86 826 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 C5orf24Q7Z6I8 188 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 SERPINA12Q8IW75 414 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 OSR2Q8N2R0 312 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 PARP16Q8N5Y8 322 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 C5orf56Q8N8D9 126 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 SUMF2Q8NBJ7 301 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 CHST4Q8NCG5 386 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 OR5D14Q8NGL3 314 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 OR13C5Q8NGS8 318 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 OR5AK2Q8NH90 309 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 CCDC107Q8WV48 283 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 AKR1E2Q96JD6 320 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 GPER1Q99527 375 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 FAM192AQ9GZU8 254 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 HEYLQ9NQ87 328 aaPredicted RBP4.9□□□□□ -1.63
NUP88-212ENST00000576708 OR6C3Q9NZP0 311 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 ING4Q9UNL4 249 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 DHDHQ9UQ10 334 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 MOB4Q9Y3A3 225 aa4.9□□□□□ -1.63
NUP88-212ENST00000576708 ORC6Q9Y5N6 252 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms