RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 RNF212BA8MTL3 300 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 NPFFO15130 113 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 FABP7O15540 132 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 ARG1P05089 322 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 SRD5A1P18405 259 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 GNG10P50151 68 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 HTD2P86397 168 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 GNMTQ14749 295 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 RNASE12Q5GAN4 147 aaKnown RBP6.97□□□□□ -1.29
NUP88-211ENST00000575976 ZNF626Q68DY1 528 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 Q6ZS49 121 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 OR10V1Q8NGI7 309 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 OR52M1Q8NGK5 317 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 OR6Q1Q8NGQ2 317 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 GPX8Q8TED1 209 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 IL1F10Q8WWZ1 152 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 GALMQ96C23 342 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 ABHD1Q96SE0 405 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 SOSTQ9BQB4 213 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 OCSTAMPQ9BR26 566 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 CLEC7AQ9BXN2 247 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 MS4A7Q9GZW8 240 aaPredicted RBP6.97□□□□□ -1.29
NUP88-211ENST00000575976 OR2S2Q9NQN1 319 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 ZNRD1Q9P1U0 126 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 JPT1Q9UK76 154 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 PSG11Q9UQ72 335 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 WNK2Q9Y3S1 2297 aa6.97□□□□□ -1.29
NUP88-211ENST00000575976 ANK3Q12955 4377 aaKnown RBP6.96□□□□□ -1.29
NUP88-211ENST00000575976 hCG_2014768A0A024R1R8 64 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 A0A1W2PPE3 182 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 FABP12A6NFH5 140 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 ODF3BA8MYP8 253 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 J3QR06 171 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 TOR1AO14656 332 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 SLC31A2O15432 143 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 YPEL1O60688 119 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 TPPPO94811 219 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 IGLV1-47P01700 117 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 EPHA1P21709 976 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 S100A5P33763 92 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 SAA4P35542 130 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 KIR2DS4P43632 304 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 CBX5P45973 191 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 BPIFB3P59826 476 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 IL18Q14116 193 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 KIR2DS1Q14954 304 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 HERPUD1Q15011 391 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 TMEM30BQ3MIR4 351 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 MORN2Q502X0 79 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 MIDNQ504T8 468 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 IGSF11Q5DX21 431 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 LDLRAD2Q5SZI1 272 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 PYHIN1Q6K0P9 492 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 LHFPL4Q7Z7J7 247 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 HOGA1Q86XE5 327 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 OR4A4PQ8NGN8 299 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 OR9G1Q8NH87 305 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 C17orf50Q8WW18 174 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 YPEL2Q96QA6 119 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 CABLES2Q9BTV7 478 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 OR1A1Q9P1Q5 309 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 GNG12Q9UBI6 72 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 SLC23A1Q9UHI7 598 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 ANAPC10Q9UM13 185 aa6.96□□□□□ -1.3
NUP88-211ENST00000575976 ZANQ9Y493 2812 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 A0A0U1RQK1 487 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 MDFIC2A0A1B0GVS7 189 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 SULT1C2O00338 296 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 BET1O15155 118 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 IFNA2P01563 188 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 LPLP06858 475 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 FAM157CP0CG43 387 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 PAX6P26367 422 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 PPP1CCP36873 323 aaKnown RBP6.95□□□□□ -1.3
NUP88-211ENST00000575976 CEACAM6P40199 344 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 ZNF134P52741 427 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 PRRX1P54821 245 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 LGALS4P56470 323 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 HLA-DRB5Q30154 266 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 DEFB112Q30KQ8 113 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 CT45A1Q5HYN5 189 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 STEAP3Q658P3 488 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 FAM131AQ6UXB0 335 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 C9orf139Q6ZV77 190 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 CCDC190Q86UF4 302 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 ZNF439Q8NDP4 499 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 BEND2Q8NDZ0 799 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 BEST4Q8NFU0 473 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 OR4P4Q8NGL7 312 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 OR52I2Q8NH67 350 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 CT45A3Q8NHU0 189 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 ZNF596Q8TC21 504 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 C15orf40Q8WUR7 153 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 TMEM158Q8WZ71 300 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 SNAPC3Q92966 411 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 AJUBAQ96IF1 538 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 ZNF48Q96MX3 618 aaPredicted RBP6.95□□□□□ -1.3
NUP88-211ENST00000575976 PARP12Q9H0J9 701 aaKnown RBP6.95□□□□□ -1.3
NUP88-211ENST00000575976 MMP28Q9H239 520 aa6.95□□□□□ -1.3
NUP88-211ENST00000575976 SCPEP1Q9HB40 452 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms