RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 Q9H521 79 aa6.91□□□□□ -1.3
SMG6-216ENST00000575176 TAF9BQ9HBM6 251 aa6.91□□□□□ -1.3
SMG6-216ENST00000575176 STEAP1Q9UHE8 339 aa6.91□□□□□ -1.3
SMG6-216ENST00000575176 AK3Q9UIJ7 227 aa6.91□□□□□ -1.3
SMG6-216ENST00000575176 HSF4Q9ULV5 492 aa6.91□□□□□ -1.3
SMG6-216ENST00000575176 STUB1Q9UNE7 303 aa6.91□□□□□ -1.3
SMG6-216ENST00000575176 V9GY05 133 aa6.91□□□□□ -1.3
SMG6-216ENST00000575176 BTBD17A6NE02 478 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 SH2D7A6NKC9 451 aaPredicted RBP6.9□□□□□ -1.3
SMG6-216ENST00000575176 ZNF736B4DX44 427 aaPredicted RBP6.9□□□□□ -1.3
SMG6-216ENST00000575176 MCRIP1C9JLW8 97 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 SDCBPO00560 298 aaPredicted RBP6.9□□□□□ -1.3
SMG6-216ENST00000575176 HSD17B6O14756 317 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 PROP1O75360 226 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 OR2F2O95006 317 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 TSPAN15O95858 294 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 CLEC2LP0C7M8 214 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 GZMHP20718 246 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 HTD2P86397 168 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 RBM39Q14498 530 aaKnown RBP6.9□□□□□ -1.3
SMG6-216ENST00000575176 C2orf76Q3KRA6 126 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 TMEM30BQ3MIR4 351 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 TCTEX1D4Q5JR98 221 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 C6orf183Q5T699 404 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 DRAM1Q8N682 238 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 KLHDC1Q8N7A1 406 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 OR10V1Q8NGI7 309 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 RTN4IP1Q8WWV3 396 aaPredicted RBP6.9□□□□□ -1.3
SMG6-216ENST00000575176 C5orf30Q96GV9 206 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 RBM14Q96PK6 669 aaKnown RBP6.9□□□□□ -1.3
SMG6-216ENST00000575176 AGMATQ9BSE5 352 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 CENPOQ9BU64 300 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 PECRQ9BY49 303 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 LIN7BQ9HAP6 207 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 PCDHB16Q9NRJ7 776 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 PLSCR3Q9NRY6 295 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 JPT1Q9UK76 154 aa6.9□□□□□ -1.3
SMG6-216ENST00000575176 ELF5Q9UKW6 265 aaPredicted RBP6.9□□□□□ -1.3
SMG6-216ENST00000575176 COL7A1Q02388 2944 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 IGKV1D-8A0A087WSZ0 117 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 IGHV1-3A0A0C4DH29 117 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 HAX1O00165 279 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 SNRNP70P08621 437 aaKnown RBP6.89□□□□□ -1.31
SMG6-216ENST00000575176 RAB3BP20337 219 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 BLVRBP30043 206 aaPredicted RBP6.89□□□□□ -1.31
SMG6-216ENST00000575176 PPP1CCP36873 323 aaKnown RBP6.89□□□□□ -1.31
SMG6-216ENST00000575176 HLA-DRB3P79483 266 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 MADCAM1Q13477 382 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 NEDD8Q15843 81 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 MORN2Q502X0 79 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 C11orf88Q6PI97 169 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 TRAT1Q6PIZ9 186 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 C10orf99Q6UWK7 81 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 ZNF833PQ6ZTB9 187 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 C16orf82Q7Z2V1 217 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 THNSL2Q86YJ6 484 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 OR8H3Q8N146 312 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 C5orf56Q8N8D9 126 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 OR52L2PQ8NGH6 319 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 OR4C13Q8NGP0 309 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 NEK7Q8TDX7 302 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 TOMM40LQ969M1 308 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 PTX4Q96A99 478 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 SLC25A33Q9BSK2 321 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 NPFFR1Q9GZQ6 430 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 TOLLIPQ9H0E2 274 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 PLGRKTQ9HBL7 147 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 Q9N2K0 584 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 RAB18Q9NP72 206 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMG6-216ENST00000575176 OR1A1Q9P1Q5 309 aa6.89□□□□□ -1.31
SMG6-216ENST00000575176 SAA2-SAA4A0A096LPE2 208 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 NOTOA8MTQ0 251 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 CRYBA1P05813 215 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 FCGR3AP08637 254 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 SAA2P0DJI9 122 aaPredicted RBP6.88□□□□□ -1.31
SMG6-216ENST00000575176 SNRPBP14678 240 aaKnown RBP6.88□□□□□ -1.31
SMG6-216ENST00000575176 HIST1H1DP16402 221 aaKnown RBP6.88□□□□□ -1.31
SMG6-216ENST00000575176 RAB6AP20340 208 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 SDC2P34741 201 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 CEACAM3P40198 252 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 REG1BP48304 166 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 VEGFCP49767 419 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 RAB7AP51149 207 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 PRRX1P54821 245 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 SFXN4Q6P4A7 337 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 MOB1BQ7L9L4 216 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 FAM71E2Q8N5Q1 922 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 SGMS2Q8NHU3 365 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 LGALS14Q8TCE9 139 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 CREB3L1Q96BA8 519 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 CABLES2Q9BTV7 478 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 ABHD14AQ9BUJ0 271 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 C12orf4Q9NQ89 552 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 PITPNC1Q9UKF7 332 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 TRAPPC2LQ9UL33 140 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 AMMECR1Q9Y4X0 333 aaPredicted RBP6.88□□□□□ -1.31
SMG6-216ENST00000575176 DNAH9Q9NYC9 4486 aa6.88□□□□□ -1.31
SMG6-216ENST00000575176 IGHV3-72A0A0B4J1Y9 119 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms