RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 OR2S2Q9NQN1 319 aa10.35□□□□□ -0.75
TRAPPC1-206ENST00000573989 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.35□□□□□ -0.75
TRAPPC1-206ENST00000573989 TNFRSF19Q9NS68 423 aa10.35□□□□□ -0.75
TRAPPC1-206ENST00000573989 JPT1Q9UK76 154 aa10.35□□□□□ -0.75
TRAPPC1-206ENST00000573989 HILPDAQ9Y5L2 63 aa10.35□□□□□ -0.75
TRAPPC1-206ENST00000573989 IGHV3-43A0A0B4J1X8 118 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 VGLL3A8MV65 326 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 BUB1B-PAK6H3BSN5 160 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 IGHV4-59P01825 116 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 LPLP06858 475 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 IGHV3-43DP0DP04 118 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 MNDAP41218 407 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 KIR2DS4P43632 304 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 LOXL3P58215 753 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 HLA-DRB3P79483 266 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 SRSF2Q01130 221 aaKnown RBP10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 MADCAM1Q13477 382 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 KIR2DS1Q14954 304 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 PNLIPRP3Q17RR3 467 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 KRTAP24-1Q3LI83 254 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 STEAP3Q658P3 488 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 LINC00311Q8N616 119 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 OR5H6Q8NGV6 325 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 UBALD1Q8TB05 177 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 C17orf50Q8WW18 174 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 IL1F10Q8WWZ1 152 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 RPEQ96AT9 228 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 CMTM3Q96MX0 182 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 OCSTAMPQ9BR26 566 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 HDHD3Q9BSH5 251 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 CHIAQ9BZP6 476 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 Q9N2K0 584 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 RAB18Q9NP72 206 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 PITPNC1Q9UKF7 332 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 VPREB3Q9UKI3 123 aa10.34□□□□□ -0.75
TRAPPC1-206ENST00000573989 H3BUX3 64 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 HSPA12AO43301 675 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 YPEL1O60688 119 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 IGHV3-7P01780 117 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 ZBTB25P24278 435 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 RAB7AP51149 207 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 DYNLT3P51808 116 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 GNG2P59768 71 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 HACD4Q5VWC8 232 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 LIAT1Q6ZQX7 453 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 SAMD12Q8N8I0 201 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 OR10V1Q8NGI7 309 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 GCDHQ92947 438 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 LEAP2Q969E1 77 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 TOMM40LQ969M1 308 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 AJUBAQ96IF1 538 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 YPEL2Q96QA6 119 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 C19orf24Q9BVV8 132 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 ABCG5Q9H222 651 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 KCNK7Q9Y2U2 307 aa10.33□□□□□ -0.76
TRAPPC1-206ENST00000573989 TRAV18A0A075B6X5 111 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 SMIM31A0A1B0GVY4 71 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 TRDCB7Z8K6 153 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 FCGR3AP08637 254 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 ZNF182P17025 639 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 DTYMKP23919 212 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 SRSF7Q16629 238 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 MORN2Q502X0 79 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 PLA1AQ53H76 456 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 LY6G6FQ5SQ64 297 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 OLFML2AQ68BL7 652 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 SLC25A48Q6ZT89 311 aaKnown RBP10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 DTX3Q8N9I9 347 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 OR2AK2Q8NG84 335 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 OR4A4PQ8NGN8 299 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 EDARADDQ8WWZ3 215 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 SLC25A38Q96DW6 304 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 COMMD3Q9UBI1 195 aa10.32□□□□□ -0.76
TRAPPC1-206ENST00000573989 A0A1W2PPE3 182 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 CCDC160A6NGH7 325 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 TXNL1O43396 289 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 XRCC3O43542 346 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 DIRAS3O95661 229 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 GAPDHP04406 335 aaKnown RBP10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 FOXL1Q12952 345 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 ZNF260Q3ZCT1 412 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 DHRS7BQ6IAN0 325 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 OR8H3Q8N146 312 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 DYNAPQ8N1N2 210 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 OR52L2PQ8NGH6 319 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 CYYR1Q96J86 154 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 ABHD14AQ9BUJ0 271 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 GHITMQ9H3K2 345 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 SLC23A1Q9UHI7 598 aa10.31□□□□□ -0.76
TRAPPC1-206ENST00000573989 TMEM235A6NFC5 223 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 LY6LH3BQJ8 138 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 HSD17B6O14756 317 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 FABP7O15540 132 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 GPR137BO60478 399 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 APOA1P02647 267 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 SCTP09683 121 aa10.3□□□□□ -0.76
TRAPPC1-206ENST00000573989 HKR1P10072 659 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms