RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 STEAP3Q658P3 488 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 CEACAM19Q7Z692 300 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 ZNF554Q86TJ5 538 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 OR10V1Q8NGI7 309 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 TM2D1Q9BX74 207 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 TAF9BQ9HBM6 251 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 TMEM14DPA8MWL7 114 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 SPINT2O43291 252 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 MPIG6BO95866 241 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 CRHBPP24387 322 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 HTR2CP28335 458 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 CD1BP29016 333 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 HES1Q14469 280 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 GNMTQ14749 295 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 ETV3LQ6ZN32 361 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 MOB3BQ86TA1 216 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 ZNF329Q86UD4 541 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 TGIF2LXQ8IUE1 241 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 ODF3L1Q8IXM7 274 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 Q8N9W7 124 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 NICN1Q9BSH3 213 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 CST11Q9H112 138 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 SCN3BQ9NY72 215 aa13.75□□□□□ -0.21
SMG6-214ENST00000573827 PSMB11A5LHX3 300 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 FOXI3A8MTJ6 420 aaPredicted RBP13.74□□□□□ -0.21
SMG6-214ENST00000573827 NAPSAO96009 420 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 RPS25P62851 125 aaKnown RBP13.74□□□□□ -0.21
SMG6-214ENST00000573827 MED22Q15528 200 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 MORN2Q502X0 79 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 HSD17B12Q53GQ0 312 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 RBM48Q5RL73 367 aaKnown RBP13.74□□□□□ -0.21
SMG6-214ENST00000573827 GLT8D1Q68CQ7 371 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 ZNF880Q6PDB4 577 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 TRAT1Q6PIZ9 186 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 OR4X2Q8NGF9 303 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 OR52L2PQ8NGH6 319 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 PHF21AQ96BD5 680 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 ISYNA1Q9NPH2 558 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 GNG12Q9UBI6 72 aa13.74□□□□□ -0.21
SMG6-214ENST00000573827 GPR12P47775 334 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 HMGN3Q15651 99 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 LY6G6FQ5SQ64 297 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 C6orf201Q7Z4U5 140 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 PRR18Q8N4B5 295 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 FAM71E2Q8N5Q1 922 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 OR2T10Q8NGZ9 312 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 UFD1Q92890 307 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 TMEM203Q969S6 136 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 FAAP24Q9BTP7 215 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 ABCG5Q9H222 651 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 LINC00527Q9UJ94 153 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 TPRKBQ9Y3C4 175 aa13.73□□□□□ -0.21
SMG6-214ENST00000573827 RGS10O43665 173 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 LANCL1O43813 399 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 IGLL1P15814 213 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 CPEP16870 476 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 IL3RAP26951 378 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 HTD2P86397 168 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 MLLT11Q13015 90 aaPredicted RBP13.72□□□□□ -0.21
SMG6-214ENST00000573827 NKAPLQ5M9Q1 402 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 C18orf65Q6ZTR6 163 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 PRSS48Q7RTY5 328 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 SVOPQ8N4V2 548 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 FAM89BQ8N5H3 189 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 OR6M1Q8NGM8 313 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 KCNG3Q8TAE7 436 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 CHPT1Q8WUD6 406 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 S1PR3Q99500 378 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 TMEM59Q9BXS4 323 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 LPAR5Q9H1C0 372 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 RAB9BQ9NP90 201 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 OR2S2Q9NQN1 319 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 LIN7CQ9NUP9 197 aaKnown RBP13.72□□□□□ -0.21
SMG6-214ENST00000573827 JPT1Q9UK76 154 aa13.72□□□□□ -0.21
SMG6-214ENST00000573827 TXNL1O43396 289 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 BPNT1O95861 308 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 MOSP00540 346 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 PF4V1P10720 104 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 PPP1CCP36873 323 aaKnown RBP13.71□□□□□ -0.21
SMG6-214ENST00000573827 MAP2K4P45985 399 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 F2RL1P55085 397 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 RPL23AP62750 156 aaKnown RBP13.71□□□□□ -0.21
SMG6-214ENST00000573827 CFHR3Q02985 330 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 LSAMPQ13449 338 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 OR2W3Q7Z3T1 314 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 SLC35E3Q7Z769 313 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 STPG2Q8N412 459 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 LINC00482Q8N8I6 264 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 NECAP2Q9NVZ3 263 aa13.71□□□□□ -0.21
SMG6-214ENST00000573827 SERPINE3A8MV23 424 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 SLC17A2O00624 439 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 YPEL1O60688 119 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 FABP5Q01469 135 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 FOXB2Q5VYV0 432 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 OR8H1Q8NGG4 311 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 RITA1Q96K30 269 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 NEDD4LQ96PU5 975 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 YPEL2Q96QA6 119 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 HSPB9Q9BQS6 159 aa13.7□□□□□ -0.22
SMG6-214ENST00000573827 ZNF251Q9BRH9 671 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms