RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 Q6ZS49 121 aa13.97□□□□□ -0.17
LITAF-212ENST00000573332 PRR18Q8N4B5 295 aa13.97□□□□□ -0.17
LITAF-212ENST00000573332 SAMD12Q8N8I0 201 aa13.97□□□□□ -0.17
LITAF-212ENST00000573332 ISOC1Q96CN7 298 aa13.97□□□□□ -0.17
LITAF-212ENST00000573332 DPAGT1Q9H3H5 408 aa13.97□□□□□ -0.17
LITAF-212ENST00000573332 AMMECR1Q9Y4X0 333 aaPredicted RBP13.97□□□□□ -0.17
LITAF-212ENST00000573332 A0A075B6Q4 140 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 OOSP1A8MZH6 123 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 H3BMQ9 156 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 XRCC3O43542 346 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 YPEL1O60688 119 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 APOA1P02647 267 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 RNASE1P07998 156 aaKnown RBP13.96□□□□□ -0.17
LITAF-212ENST00000573332 CEACAM3P40198 252 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 DYNLT3P51808 116 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 MORN2Q502X0 79 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 MZT2AQ6P582 158 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 DYNAPQ8N1N2 210 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 ZNF439Q8NDP4 499 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 OR5R1Q8NH85 324 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 SETD6Q8TBK2 473 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 FAM216AQ8WUB2 273 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 LEAP2Q969E1 77 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 YPEL2Q96QA6 119 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 OCSTAMPQ9BR26 566 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 OR2S2Q9NQN1 319 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 COMMD3Q9UBI1 195 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 GNG12Q9UBI6 72 aa13.96□□□□□ -0.17
LITAF-212ENST00000573332 TRAV18A0A075B6X5 111 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 IGHV3-43A0A0B4J1X8 118 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 TRDCB7Z8K6 153 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 DIRAS3O95661 229 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 IGHV4-59P01825 116 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 IGHV3-43DP0DP04 118 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 SOX6P35712 828 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 KIR2DS4P43632 304 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 KIR2DS1Q14954 304 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 SSX2Q16385 188 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 LRRC75BQ2VPJ9 315 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 SLC25A48Q6ZT89 311 aaKnown RBP13.95□□□□□ -0.18
LITAF-212ENST00000573332 C5orf24Q7Z6I8 188 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 OR52L2PQ8NGH6 319 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 DYNC2LI1Q8TCX1 351 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 TMEM158Q8WZ71 300 aa13.95□□□□□ -0.18
LITAF-212ENST00000573332 RBM38Q9H0Z9 239 aaKnown RBP13.95□□□□□ -0.18
LITAF-212ENST00000573332 ELF5Q9UKW6 265 aaPredicted RBP13.95□□□□□ -0.18
LITAF-212ENST00000573332 TMEM235A6NFC5 223 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 ZNF701M0R085 212 aaPredicted RBP13.94□□□□□ -0.18
LITAF-212ENST00000573332 RGS11O94810 467 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 IGHV3-7P01780 117 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 SCTP09683 121 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 TALDO1P37837 337 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 GNG10P50151 68 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 SRSF2Q01130 221 aaKnown RBP13.94□□□□□ -0.18
LITAF-212ENST00000573332 KRTAP24-1Q3LI83 254 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 TPTE2P1Q5T6R2 138 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 FAM53AQ6NSI3 398 aaPredicted RBP13.94□□□□□ -0.18
LITAF-212ENST00000573332 C16orf87Q6PH81 154 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 OR4A4PQ8NGN8 299 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 PIFOQ8TCI5 191 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 SSX3Q99909 188 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 AUNIPQ9H7T9 357 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 CCDC59Q9P031 241 aaKnown RBP13.94□□□□□ -0.18
LITAF-212ENST00000573332 HILPDAQ9Y5L2 63 aa13.94□□□□□ -0.18
LITAF-212ENST00000573332 BTBD17A6NE02 478 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 ITGB1BP1O14713 200 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 FABP7O15540 132 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 SSX5O60225 188 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 EIF4EP06730 217 aaKnown RBP13.93□□□□□ -0.18
LITAF-212ENST00000573332 ZNF134P52741 427 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 ZNF137PP52743 207 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 GNG2P59768 71 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 RPL15P61313 204 aaKnown RBP13.93□□□□□ -0.18
LITAF-212ENST00000573332 MADCAM1Q13477 382 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 CT45A1Q5HYN5 189 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 OR10V1Q8NGI7 309 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 CT45A3Q8NHU0 189 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 DUX5Q96PT3 197 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 CABLES2Q9BTV7 478 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 CHIAQ9BZP6 476 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 TOLLIPQ9H0E2 274 aa13.93□□□□□ -0.18
LITAF-212ENST00000573332 ZBTB25P24278 435 aa13.92□□□□□ -0.18
LITAF-212ENST00000573332 PAX6P26367 422 aa13.92□□□□□ -0.18
LITAF-212ENST00000573332 MNDAP41218 407 aa13.92□□□□□ -0.18
LITAF-212ENST00000573332 GNMTQ14749 295 aa13.92□□□□□ -0.18
LITAF-212ENST00000573332 CCDC144NLQ6NUI1 221 aa13.92□□□□□ -0.18
LITAF-212ENST00000573332 OR10X1Q8NGY0 326 aa13.92□□□□□ -0.18
LITAF-212ENST00000573332 NUDCD2Q8WVJ2 157 aa13.92□□□□□ -0.18
LITAF-212ENST00000573332 IL1F10Q8WWZ1 152 aa13.92□□□□□ -0.18
LITAF-212ENST00000573332 ST6GALNAC6Q969X2 333 aa13.92□□□□□ -0.18
LITAF-212ENST00000573332 ZNF230Q9UIE0 474 aaPredicted RBP13.92□□□□□ -0.18
LITAF-212ENST00000573332 VPREB3Q9UKI3 123 aa13.92□□□□□ -0.18
LITAF-212ENST00000573332 IGKV1-6A0A0C4DH72 117 aa13.91□□□□□ -0.18
LITAF-212ENST00000573332 A0A1W2PPE3 182 aa13.91□□□□□ -0.18
LITAF-212ENST00000573332 H3BUX3 64 aa13.91□□□□□ -0.18
LITAF-212ENST00000573332 SLC31A2O15432 143 aa13.91□□□□□ -0.18
LITAF-212ENST00000573332 HPGDSO60760 199 aa13.91□□□□□ -0.18
LITAF-212ENST00000573332 ELK1P19419 428 aa13.91□□□□□ -0.18
LITAF-212ENST00000573332 IL3RAP26951 378 aa13.91□□□□□ -0.18
LITAF-212ENST00000573332 PPP1CCP36873 323 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms