RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 FFAR4Q5NUL3 377 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 TMEM78Q5T7P6 136 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 OR4A47Q6IF82 309 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 UNQ9370/PRO34162Q6UXP9 181 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 C20orf204Q6ZNR8 217 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 Q71RC1 249 aaPredicted RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 SHFQ7M4L6 423 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 MARCH3Q86UD3 253 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 PDZD9Q8IXQ8 264 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 DND1Q8IYX4 353 aaKnown RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 CMTM4Q8IZR5 234 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ACBD7Q8N6N7 88 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 TPRX1Q8N7U7 411 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ZNF441Q8N8Z8 693 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 APCDD1LQ8NCL9 501 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 MDS2Q8NDY4 140 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 PLPP5Q8NEB5 264 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 DUSP18Q8NEJ0 188 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 OR10G9Q8NGN4 311 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 OR5B3Q8NH48 314 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 OR14A16Q8NHC5 309 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 GNPDA2Q8TDQ7 276 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 TCTEX1D2Q8WW35 142 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ACOT12Q8WYK0 555 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 RPUSD4Q96CM3 377 aaKnown RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 ZNF503Q96F45 646 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ZNF488Q96MN9 340 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ADOQ96SZ5 270 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 CHIAQ9BZP6 476 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 POLR2J3Q9H1A7 115 aaKnown RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 ABCG5Q9H222 651 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 TMPRSS5Q9H3S3 457 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ZDHHC11Q9H8X9 412 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 MEPEQ9NQ76 525 aaPredicted RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 TVP23BQ9NYZ1 205 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 DOK5Q9P104 306 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 ZNF319Q9P2F9 582 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 B3GAT1Q9P2W7 334 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 SS18L2Q9UHA2 77 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 SCP2D1Q9UJQ7 156 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 PSG8Q9UQ74 426 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 RNF114Q9Y508 228 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 MUC3AQ02505 3323 aa3.01□□□□□ -1.93
SMG6-208ENST00000570874 HEATR1Q9H583 2144 aaKnown RBP3.01□□□□□ -1.93
SMG6-208ENST00000570874 MYO15AQ9UKN7 3530 aa3□□□□□ -1.93
SMG6-208ENST00000570874 IGKV1D-42A0A075B6H8 117 aa3□□□□□ -1.93
SMG6-208ENST00000570874 A0A087WUJ7 227 aa3□□□□□ -1.93
SMG6-208ENST00000570874 DAPL1A0PJW8 107 aa3□□□□□ -1.93
SMG6-208ENST00000570874 A1L4Q6 167 aa3□□□□□ -1.93
SMG6-208ENST00000570874 MAP1LC3B2A6NCE7 125 aa3□□□□□ -1.93
SMG6-208ENST00000570874 NKX2-6A6NCS4 301 aa3□□□□□ -1.93
SMG6-208ENST00000570874 FAM231BA6NCW3 169 aa3□□□□□ -1.93
SMG6-208ENST00000570874 UNC119BA6NIH7 251 aa3□□□□□ -1.93
SMG6-208ENST00000570874 FAM183AA6NL82 134 aa3□□□□□ -1.93
SMG6-208ENST00000570874 DHRS7CA6NNS2 312 aa3□□□□□ -1.93
SMG6-208ENST00000570874 FAM166BA8MTA8 275 aa3□□□□□ -1.93
SMG6-208ENST00000570874 MPTX1A8MV57 137 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ZNF670-ZNF695F2Z2N8 137 aa3□□□□□ -1.93
SMG6-208ENST00000570874 PRYO14603 147 aa3□□□□□ -1.93
SMG6-208ENST00000570874 EFNA2O43921 213 aa3□□□□□ -1.93
SMG6-208ENST00000570874 SOX15O60248 233 aa3□□□□□ -1.93
SMG6-208ENST00000570874 PPP1R3DO95685 299 aa3□□□□□ -1.93
SMG6-208ENST00000570874 PTHP01270 115 aa3□□□□□ -1.93
SMG6-208ENST00000570874 HLA-DQB1P01920 261 aa3□□□□□ -1.93
SMG6-208ENST00000570874 CD37P11049 281 aa3□□□□□ -1.93
SMG6-208ENST00000570874 IL7P13232 177 aa3□□□□□ -1.93
SMG6-208ENST00000570874 IGFBP3P17936 291 aaPredicted RBP3□□□□□ -1.93
SMG6-208ENST00000570874 CD34P28906 385 aa3□□□□□ -1.93
SMG6-208ENST00000570874 SDC2P34741 201 aa3□□□□□ -1.93
SMG6-208ENST00000570874 MDH2P40926 338 aaKnown RBP3□□□□□ -1.93
SMG6-208ENST00000570874 PTGDSP41222 190 aa3□□□□□ -1.93
SMG6-208ENST00000570874 KIR2DS4P43632 304 aa3□□□□□ -1.93
SMG6-208ENST00000570874 PPICP45877 212 aa3□□□□□ -1.93
SMG6-208ENST00000570874 OR3A2P47893 321 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ERVFRD-1P60508 538 aa3□□□□□ -1.93
SMG6-208ENST00000570874 NCS1P62166 190 aa3□□□□□ -1.93
SMG6-208ENST00000570874 LSM3P62310 102 aaKnown RBP3□□□□□ -1.93
SMG6-208ENST00000570874 BTG1P62324 171 aa3□□□□□ -1.93
SMG6-208ENST00000570874 HIST1H3AP68431 136 aa3□□□□□ -1.93
SMG6-208ENST00000570874 DCDP81605 110 aaKnown RBP3□□□□□ -1.93
SMG6-208ENST00000570874 H3F3AP84243 136 aa3□□□□□ -1.93
SMG6-208ENST00000570874 DGCR2P98153 550 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ZNF117Q03924 483 aa3□□□□□ -1.93
SMG6-208ENST00000570874 LTBQ06643 244 aa3□□□□□ -1.93
SMG6-208ENST00000570874 BAXQ07812 192 aa3□□□□□ -1.93
SMG6-208ENST00000570874 PLCXD2Q0VAA5 305 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ST3GAL4Q11206 333 aa3□□□□□ -1.93
SMG6-208ENST00000570874 GUSBP1Q15486 140 aa3□□□□□ -1.93
SMG6-208ENST00000570874 IZUMO4Q1ZYL8 232 aa3□□□□□ -1.93
SMG6-208ENST00000570874 CR1LQ2VPA4 569 aa3□□□□□ -1.93
SMG6-208ENST00000570874 SLC25A35Q3KQZ1 300 aa3□□□□□ -1.93
SMG6-208ENST00000570874 PABPC1L2AQ5JQF8 200 aa3□□□□□ -1.93
SMG6-208ENST00000570874 AKR1C8PQ5T2L2 129 aa3□□□□□ -1.93
SMG6-208ENST00000570874 C1QL3Q5VWW1 255 aa3□□□□□ -1.93
SMG6-208ENST00000570874 OTPQ5XKR4 325 aa3□□□□□ -1.93
SMG6-208ENST00000570874 HBMQ6B0K9 141 aa3□□□□□ -1.93
SMG6-208ENST00000570874 STEAP1BQ6NZ63 245 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ZNF613Q6PF04 617 aa3□□□□□ -1.93
SMG6-208ENST00000570874 SLC25A47Q6Q0C1 308 aa3□□□□□ -1.93
SMG6-208ENST00000570874 OPN5Q6U736 354 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms