RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 TMPRSS11AQ6ZMR5 421 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 LINC00596Q86U02 117 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 RNF152Q8N8N0 203 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 C8orf31Q8N9H6 132 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 OR1N2Q8NGR9 330 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 CASTOR1Q8WTX7 329 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 SMIM19Q96E16 107 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 OR14A2Q96R54 314 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 SELENOIQ9C0D9 397 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 ALX4Q9H161 411 aaPredicted RBP6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 TAF9BQ9HBM6 251 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 OR2S2Q9NQN1 319 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 PARP11Q9NR21 331 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 BABAM2Q9NXR7 383 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 HUWE1Q7Z6Z7 4374 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 TRBV5-5A0A0J9YX44 114 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 ATP6V0E1O15342 81 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF780AO75290 641 aaPredicted RBP6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 CRTAPO75718 401 aaPredicted RBP6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 MYL12AP19105 171 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 DCKP27707 260 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 PPP1CCP36873 323 aaKnown RBP6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 OR3A3P47888 321 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 ACTBP60709 375 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 RPS11P62280 158 aaKnown RBP eCLIP6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 GNB1P62873 340 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 LSAMPQ13449 338 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 FHL3Q13643 280 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 C6orf183Q5T699 404 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 ASPHD1Q5U4P2 390 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 SIGIRRQ6IA17 410 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 TMEM65Q6PI78 240 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 OVCH2Q7RTZ1 564 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 PQLC1Q8N2U9 271 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF555Q8NEP9 628 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 OR8H1Q8NGG4 311 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 FAM46BQ96A09 425 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 MRPL20Q9BYC9 149 aaKnown RBP6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 ANKRD60Q9BZ19 345 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 S100A14Q9HCY8 104 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 RCC2Q9P258 522 aaKnown RBP6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 CKLFQ9UBR5 152 aa6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF256Q9Y2P7 627 aaPredicted RBP6.7□□□□□ -1.34
CTDNEP1-203ENST00000570385 TXNL1O43396 289 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 LANCL1O43813 399 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 IGF1P05019 195 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 MGMTP16455 207 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 BLVRBP30043 206 aaPredicted RBP6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 PPIFP30405 207 aaKnown RBP6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF137PP52743 207 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 KIAA0141Q14154 515 aaPredicted RBP6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 GPR176Q14439 515 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 ECSCRQ19T08 205 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 LRRC36Q1X8D7 754 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 Q499Y3 187 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 MORN2Q502X0 79 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 DMKNQ6E0U4 476 aaPredicted RBP6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 SBSPONQ8IVN8 264 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF491Q8N8L2 437 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 CYGBQ8WWM9 190 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 DCUN1D4Q92564 292 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 PGLYRP3Q96LB9 341 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF251Q9BRH9 671 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 ABHD14AQ9BUJ0 271 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 OR51J1Q9H342 316 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 SPACA1Q9HBV2 294 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 GAR1Q9NY12 217 aaKnown RBP6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 DIMT1Q9UNQ2 313 aaKnown RBP6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 EXOSC1Q9Y3B2 195 aaKnown RBP6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 A3GALT2U3KPV4 340 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 TENM2Q9NT68 2774 aa6.69□□□□□ -1.34
CTDNEP1-203ENST00000570385 TRBV5-7A0A0A0MS05 114 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 IGHV7-81A0A0B4J1V7 117 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 TRAV41A0A0B4J266 112 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 I3L521 148 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 SAP30O75446 220 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 GPX5O75715 221 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 OR5H8P0DN80 308 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 SNRPBP14678 240 aaKnown RBP6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 FUT3P21217 361 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 CAPGP40121 348 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 RAB9AP51151 201 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 SLURP1P55000 103 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 NDPQ00604 133 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 GABPB1Q06547 395 aaPredicted RBP6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZNF616Q08AN1 781 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 DOC2BQ14184 412 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 INSL4Q14641 139 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 C5orf64Q2M2E5 130 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 Q3ZCU0 254 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 YIF1BQ5BJH7 314 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 OR10K2Q6IF99 312 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 LIN54Q6MZP7 749 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 ODF3L1Q8IXM7 274 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 MRPL30Q8TCC3 161 aaKnown RBP6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 MYOZ3Q8TDC0 251 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 IL1F10Q8WWZ1 152 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 TMEM80Q96HE8 168 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 UBE2E2Q96LR5 201 aa6.68□□□□□ -1.34
CTDNEP1-203ENST00000570385 Q96M66 194 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms