RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 VSIG8P0DPA2 414 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SRMP19623 302 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 CHATP28329 748 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 RPS27AP62979 156 aaKnown RBP13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 QRFPP83859 136 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 TPBGQ13641 420 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 MORN2Q502X0 79 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 Q6ZPA2 131 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 FOXRED2Q8IWF2 684 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 STPG2Q8N412 459 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 Q8N9W7 124 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 OR1L1Q8NH94 360 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 KCNG3Q8TAE7 436 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 NRG4Q8WWG1 115 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ANKRD60Q9BZ19 345 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 TAF9BQ9HBM6 251 aa13.49□□□□□ -0.25
MAP1LC3B-208ENST00000570189 TMEM14DPA8MWL7 114 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 PTGES3LE9PB15 166 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 AP4M1O00189 453 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 YPEL1O60688 119 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 PF4P02776 101 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 MYF6P23409 242 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 REG1BP48304 166 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 AQP4P55087 323 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 RPL23AP62750 156 aaKnown RBP13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SLC35B1P78383 322 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 HNF4GQ14541 408 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 INSL4Q14641 139 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 TRAM1Q15629 374 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 FAM27D1Q5T7N8 215 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 FAM53AQ6NSI3 398 aaPredicted RBP13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 FAM71E2Q8N5Q1 922 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 UBALD1Q8TB05 177 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 YPEL2Q96QA6 119 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 TMEM59Q9BXS4 323 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 GON7Q9BXV9 100 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 KCNIP1Q9NZI2 227 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 TPRKBQ9Y3C4 175 aa13.48□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SERPINE3A8MV23 424 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 BPNT1O95861 308 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 MPIG6BO95866 241 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 NAPSAO96009 420 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 PSMA1P25786 263 aaKnown RBP13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 HTR2CP28335 458 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 GPR12P47775 334 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 MED22Q15528 200 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 HMGN3Q15651 99 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 HSD17B12Q53GQ0 312 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 RBM48Q5RL73 367 aaKnown RBP13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 FOXB2Q5VYV0 432 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ZNF880Q6PDB4 577 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ETV3LQ6ZN32 361 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 LINC00482Q8N8I6 264 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 RNF152Q8N8N0 203 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 OR51D1Q8NGF3 324 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 OR6M1Q8NGM8 313 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 UFD1Q92890 307 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 FAM46BQ96A09 425 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 NOL4LQ96MY1 436 aaPredicted RBP13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 NEDD4LQ96PU5 975 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 S1PR3Q99500 378 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 TMED9Q9BVK6 235 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 OR2S2Q9NQN1 319 aa13.47□□□□□ -0.25
MAP1LC3B-208ENST00000570189 TRBV6-6A0A0A6YYG2 114 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 IGHV3-72A0A0B4J1Y9 119 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 UBE2QL1A1L167 161 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ANKRD65E5RJM6 399 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 RGS11O94810 467 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 UNC119Q13432 240 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 LSAMPQ13449 338 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 FAM71F2Q6NXP2 309 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 OR2W3Q7Z3T1 314 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 CEACAM19Q7Z692 300 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ZNF329Q86UD4 541 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ODF3L1Q8IXM7 274 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SGCDQ92629 289 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 SULT4A1Q9BR01 284 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 CHCHD6Q9BRQ6 235 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 ABHD14AQ9BUJ0 271 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 GPR61Q9BZJ8 451 aa13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 AURKAIP1Q9NWT8 199 aaPredicted RBP13.46□□□□□ -0.25
MAP1LC3B-208ENST00000570189 NCBP2LA6PVI3 153 aaKnown RBP13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 IGF1P05019 195 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 IGLL1P15814 213 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 THBS3P49746 956 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 EGFEM1PQ0D2K5 195 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 MLLT11Q13015 90 aaPredicted RBP13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 LIPKQ5VXJ0 399 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 TEX38Q6PEX7 206 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 TMEM91Q6ZNR0 172 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 MOB1BQ7L9L4 216 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 PRSS48Q7RTY5 328 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 PRR18Q8N4B5 295 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 FAM89BQ8N5H3 189 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 OR10V1Q8NGI7 309 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 GALMQ96C23 342 aa13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 RIMS4Q9H426 269 aaPredicted RBP13.45□□□□□ -0.26
MAP1LC3B-208ENST00000570189 ZNF736B4DX44 427 aaPredicted RBP13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 SLC17A2O00624 439 aa13.44□□□□□ -0.26
MAP1LC3B-208ENST00000570189 ITGB1BP1O14713 200 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms