RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 SOCS1O15524 211 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 PEX14O75381 377 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 SCGNO76038 276 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 NAPSAO96009 420 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 IGHV3-7P01780 117 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 GAPDHP04406 335 aaKnown RBP7.89□□□□□ -1.15
CLN6-209ENST00000569336 FAM106CPP0CH98 169 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 CD36P16671 472 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 VEGFCP49767 419 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 RAB13P51153 203 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 OR10A3P58181 314 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 PROK1P58294 105 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 HTD2P86397 168 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 ZNF816Q0VGE8 651 aaPredicted RBP7.89□□□□□ -1.15
CLN6-209ENST00000569336 ARL6IP1Q15041 203 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 HMGN3Q15651 99 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 C2orf76Q3KRA6 126 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 Q6ZTK2 550 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 TSPAN14Q8NG11 270 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 UBALD1Q8TB05 177 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 SETD6Q8TBK2 473 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 TAF15Q92804 592 aaKnown RBP eCLIP7.89□□□□□ -1.15
CLN6-209ENST00000569336 CHCHD6Q9BRQ6 235 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 OR2S2Q9NQN1 319 aa7.89□□□□□ -1.15
CLN6-209ENST00000569336 CMYA5Q8N3K9 4069 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 A0A0A6YYD4 124 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 TRBV6-6A0A0A6YYG2 114 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 IGHV3-43A0A0B4J1X8 118 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 A0A1W2PPI3 338 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 SHISA3A0PJX4 238 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 FOXI3A8MTJ6 420 aaPredicted RBP7.88□□□□□ -1.15
CLN6-209ENST00000569336 TIMM23O14925 209 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 LDLRAD4O15165 306 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 TMEM127O75204 238 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 OR2F2O95006 317 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 IGHV3-43DP0DP04 118 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 ZNF137PP52743 207 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 EFNB2P52799 333 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 SCAND1P57086 179 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 LY6G6FQ5SQ64 297 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 SFXN4Q6P4A7 337 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 SLC25A48Q6ZT89 311 aaKnown RBP7.88□□□□□ -1.15
CLN6-209ENST00000569336 OR2AK2Q8NG84 335 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 OR56B4Q8NH76 319 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 OR1L1Q8NH94 360 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 RAB3CQ96E17 227 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 ARHGAP5-AS1Q96IT6 56 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 RBM14Q96PK6 669 aaKnown RBP7.88□□□□□ -1.15
CLN6-209ENST00000569336 CITED1Q99966 193 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 CMSS1Q9BQ75 279 aaKnown RBP7.88□□□□□ -1.15
CLN6-209ENST00000569336 SLC25A33Q9BSK2 321 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 ABHD14AQ9BUJ0 271 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 OR51E2Q9H255 320 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 ZNF696Q9H7X3 374 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 AK3Q9UIJ7 227 aa7.88□□□□□ -1.15
CLN6-209ENST00000569336 IGHV1-3A0A0C4DH29 117 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 A0A1W2PPE3 182 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 SERPINE3A8MV23 424 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 M0QZ24 198 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 YPEL1O60688 119 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 CD3GP09693 182 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 JUNBP17275 347 aaPredicted RBP7.87□□□□□ -1.15
CLN6-209ENST00000569336 HLA-DRB3P79483 266 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 HES1Q14469 280 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 HABP2Q14520 560 aaPredicted RBP7.87□□□□□ -1.15
CLN6-209ENST00000569336 UTF1Q5T230 341 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 ZNF880Q6PDB4 577 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 CCBE1Q6UXH8 406 aaPredicted RBP7.87□□□□□ -1.15
CLN6-209ENST00000569336 THNSL2Q86YJ6 484 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 TGIF2LXQ8IUE1 241 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 CROCCP3Q8IVE0 287 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 IZUMO1Q8IYV9 350 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 Q8N2B8 174 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 DRAM1Q8N682 238 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 ZNF439Q8NDP4 499 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 OR10V1Q8NGI7 309 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 OR10R2Q8NGX6 335 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 RTN4IP1Q8WWV3 396 aaPredicted RBP7.87□□□□□ -1.15
CLN6-209ENST00000569336 IL1F10Q8WWZ1 152 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 CFHR4Q92496 578 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 PHF21AQ96BD5 680 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 YPEL2Q96QA6 119 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 CENPOQ9BU64 300 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 PECRQ9BY49 303 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 ZNF702PQ9H963 129 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 DAPK2Q9UIK4 370 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 MOB4Q9Y3A3 225 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 ETV7Q9Y603 341 aa7.87□□□□□ -1.15
CLN6-209ENST00000569336 MEGF8Q7Z7M0 2845 aa7.86□□□□□ -1.15
CLN6-209ENST00000569336 SMIM30A4D0T7 59 aa7.86□□□□□ -1.15
CLN6-209ENST00000569336 HSPA12AO43301 675 aa7.86□□□□□ -1.15
CLN6-209ENST00000569336 AIREO43918 545 aa7.86□□□□□ -1.15
CLN6-209ENST00000569336 SNRNP70P08621 437 aaKnown RBP7.86□□□□□ -1.15
CLN6-209ENST00000569336 HIST1H1DP16402 221 aaKnown RBP7.86□□□□□ -1.15
CLN6-209ENST00000569336 TMEM11P17152 192 aa7.86□□□□□ -1.15
CLN6-209ENST00000569336 ZBTB25P24278 435 aa7.86□□□□□ -1.15
CLN6-209ENST00000569336 CD24P25063 80 aa7.86□□□□□ -1.15
CLN6-209ENST00000569336 SDC2P34741 201 aa7.86□□□□□ -1.15
CLN6-209ENST00000569336 PPP1CCP36873 323 aaKnown RBP7.86□□□□□ -1.15
CLN6-209ENST00000569336 VDAC2P45880 294 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms