RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 BUB1B-PAK6H3BSN5 160 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 PDCD6O75340 191 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 IGLV1-47P01700 117 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 NFYBP25208 207 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 GLP1RP43220 463 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 KIR2DS4P43632 304 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 RPS27AP62979 156 aaKnown RBP7.41□□□□□ -1.22
CAPN3-219ENST00000569136 QRFPP83859 136 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 RAB11BQ15907 218 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 KCTD21Q4G0X4 260 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 C6orf183Q5T699 404 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 PRAMEF5Q5TYX0 476 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 OLFML2AQ68BL7 652 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 LHFPL4Q7Z7J7 247 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 GAPTQ8N292 157 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 C8orf31Q8N9H6 132 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 OR4P4Q8NGL7 312 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 RFESDQ8TAC1 157 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 PLPPR1Q8TBJ4 325 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 PIFOQ8TCI5 191 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 MRGPRDQ8TDS7 321 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 ARL11Q969Q4 196 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 NKX3-1Q99801 234 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-219ENST00000569136 TM2D1Q9BX74 207 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 TMEM59Q9BXS4 323 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 NPFFR1Q9GZQ6 430 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 RAB22AQ9UL26 194 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 TRAPPC2LQ9UL33 140 aa7.41□□□□□ -1.22
CAPN3-219ENST00000569136 AK6Q9Y3D8 172 aaKnown RBP7.41□□□□□ -1.22
CAPN3-219ENST00000569136 AMMECR1Q9Y4X0 333 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-219ENST00000569136 TMEM14DPA8MWL7 114 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 LY6LH3BQJ8 138 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 J3QR06 171 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 AIPO00170 330 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 FAM106CPP0CH98 169 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 OMGP23515 440 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 MYL9P24844 172 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 PSMB9P28065 219 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 FGF9P31371 208 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-219ENST00000569136 MNDAP41218 407 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 MADCAM1Q13477 382 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 SSX1Q16384 188 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 HLA-DRB5Q30154 266 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 C2orf76Q3KRA6 126 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 SYT6Q5T7P8 510 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-219ENST00000569136 TPRA1Q86W33 373 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 FAM89BQ8N5H3 189 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 LINC00311Q8N616 119 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 LINC01006Q8NI28 216 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 CCDC107Q8WV48 283 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 FAM46BQ96A09 425 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 FAM3DQ96BQ1 224 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 AKR1E2Q96JD6 320 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 MMP28Q9H239 520 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 RANBP3Q9H6Z4 567 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-219ENST00000569136 PLEKHJ1Q9NW61 149 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 STEAP1Q9UHE8 339 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 HSF4Q9ULV5 492 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 MGAT4AQ9UM21 535 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 SSR3Q9UNL2 185 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 HILPDAQ9Y5L2 63 aa7.4□□□□□ -1.22
CAPN3-219ENST00000569136 MGAM2Q2M2H8 2515 aa7.4□□□□□ -1.23
CAPN3-219ENST00000569136 KIAA2026Q5HYC2 2103 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 A6NDX4 124 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 C15orf65H3BRN8 121 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 F2RL2O00254 374 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 MDKP21741 143 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-219ENST00000569136 BLVRBP30043 206 aaPredicted RBP7.39□□□□□ -1.23
CAPN3-219ENST00000569136 LY6EQ16553 131 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 TOR2AQ5JU69 321 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 SIGIRRQ6IA17 410 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 Q6ZSV7 163 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 C16orf82Q7Z2V1 217 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 DYNAPQ8N1N2 210 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 OR56B1Q8NGI3 324 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 OR4C13Q8NGP0 309 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 OR10X1Q8NGY0 326 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 CAPSLQ8WWF8 208 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 PTX4Q96A99 478 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 RPEQ96AT9 228 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 ZNF286AQ9HBT8 521 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 VCX3AQ9NNX9 186 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 ZNF581Q9P0T4 197 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 STUB1Q9UNE7 303 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 PSG11Q9UQ72 335 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 TCF19Q9Y242 345 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 TENM1Q9UKZ4 2725 aa7.39□□□□□ -1.23
CAPN3-219ENST00000569136 A0A087WXM4 84 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 TRBV6-6A0A0A6YYG2 114 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 UBE2QL1A1L167 161 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 METTL21EPA6NDL7 271 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 IFITM5A6NNB3 132 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 M0QZK8 103 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 SDCBPO00560 298 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-219ENST00000569136 RGS11O94810 467 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 GAPDHP04406 335 aaKnown RBP7.38□□□□□ -1.23
CAPN3-219ENST00000569136 RAB3BP20337 219 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 IL3RAP26951 378 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 CHATP28329 748 aa7.38□□□□□ -1.23
CAPN3-219ENST00000569136 SSTR5P35346 364 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms