RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 RPS10-NUDT3A0A1W2PQS6 291 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 LRP5LA4QPB2 252 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 TMEM210A6NLX4 147 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 J3QT63 122 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 HPGDSO60760 199 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 CYB5R3P00387 301 aaPredicted RBP6.55□□□□□ -1.36
CDH11-216ENST00000569128 CD55P08174 381 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 SERPINA2P20848 420 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 LMO1P25800 156 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 NR4A2P43354 598 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 NKX2-1P43699 371 aaPredicted RBP6.55□□□□□ -1.36
CDH11-216ENST00000569128 SRP9P49458 86 aaKnown RBP6.55□□□□□ -1.36
CDH11-216ENST00000569128 PPOXP50336 477 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 PSMD7P51665 324 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 UNC119Q13432 240 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 DGUOKQ16854 277 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 SLC22A6Q4U2R8 563 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 FAM159AQ6UWV7 190 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 WDR82Q6UXN9 313 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 ASCL4Q6XD76 172 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 OR6M1Q8NGM8 313 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 MCFD2Q8NI22 146 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 ZNF671Q8TAW3 534 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 UQCC2Q9BRT2 126 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 NXF2Q9GZY0 626 aaKnown RBP6.55□□□□□ -1.36
CDH11-216ENST00000569128 TLNRD1Q9H1K6 362 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 WDR13Q9H1Z4 485 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 NCOR1P1Q9H4R4 102 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 ABCB9Q9NP78 766 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 FAIMQ9NVQ4 179 aa6.55□□□□□ -1.36
CDH11-216ENST00000569128 RBFOX1Q9NWB1 397 aaKnown RBP6.55□□□□□ -1.36
CDH11-216ENST00000569128 NOP16Q9Y3C1 178 aaKnown RBP6.55□□□□□ -1.36
CDH11-216ENST00000569128 IGHV3OR15-7A0A075B7D8 119 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 A0A0A6YYD4 124 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 TMEM14DPA8MWL7 114 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.54□□□□□ -1.36
CDH11-216ENST00000569128 OVOL3O00110 214 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 TNFRSF13BO14836 293 aaPredicted RBP6.54□□□□□ -1.36
CDH11-216ENST00000569128 KDM4BO94953 1096 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 EIF4EP06730 217 aaKnown RBP6.54□□□□□ -1.36
CDH11-216ENST00000569128 PGA5P0DJD9 388 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 CD80P33681 288 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 RSU1Q15404 277 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 ZNF404Q494X3 552 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 FAM122CQ6P4D5 195 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 PXT1Q8NFP0 134 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 OR11H4Q8NGC9 324 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 OR5T2Q8NGG2 359 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 LRRC29Q8WV35 223 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 SLC25A38Q96DW6 304 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 NICN1Q9BSH3 213 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 PKIBQ9C010 78 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 C6orf62Q9GZU0 229 aaPredicted RBP6.54□□□□□ -1.36
CDH11-216ENST00000569128 METTL9Q9H1A3 318 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 RIMS4Q9H426 269 aaPredicted RBP6.54□□□□□ -1.36
CDH11-216ENST00000569128 RNF7Q9UBF6 113 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 PPP1R3CQ9UQK1 317 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 DYSFO75923 2080 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 LRBAP50851 2863 aa6.54□□□□□ -1.36
CDH11-216ENST00000569128 GCN1Q92616 2671 aaKnown RBP6.53□□□□□ -1.36
CDH11-216ENST00000569128 AKAP6Q13023 2319 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 A0A075B6Q4 140 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 TMEM89A2RUT3 159 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 TRAPPC2LH3BP13 241 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 CRTAPO75718 401 aaPredicted RBP6.53□□□□□ -1.36
CDH11-216ENST00000569128 LHBP01229 141 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 ELK1P19419 428 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 SSTR2P30874 369 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 OR3A3P47888 321 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 CEBPDP49716 269 aaPredicted RBP6.53□□□□□ -1.36
CDH11-216ENST00000569128 ERVK11-1P61568 191 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 PIGYQ3MUY2 71 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 MOGAT2Q3SYC2 334 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 PHLDA2Q53GA4 152 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 MKXQ8IYA7 352 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 SAXO1Q8IYX7 474 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 SAMD12Q8N8I0 201 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 ZSCAN4Q8NAM6 433 aaPredicted RBP6.53□□□□□ -1.36
CDH11-216ENST00000569128 POC1AQ8NBT0 407 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 DEFB108BQ8NET1 73 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 OR6Q1Q8NGQ2 317 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 CCL17Q92583 94 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 CEP19Q96LK0 163 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 S100A13Q99584 98 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 CCL19Q99731 98 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 NRIP2Q9BQI9 281 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 SELENOIQ9C0D9 397 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 RAB1BQ9H0U4 201 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 LPAR5Q9H1C0 372 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 FN3KRPQ9HA64 309 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 PTTG2Q9NZH5 202 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 ABRACLQ9P1F3 81 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 SPATA2Q9UM82 520 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 DCHS2Q6V1P9 2916 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 USF3Q68DE3 2245 aa6.53□□□□□ -1.36
CDH11-216ENST00000569128 FASNP49327 2511 aaKnown RBP6.52□□□□□ -1.37
CDH11-216ENST00000569128 FBN2P35556 2912 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 IGHV1-69-2A0A0G2JMI3 117 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 XKRY2A2RUG3 117 aa6.52□□□□□ -1.37
CDH11-216ENST00000569128 SRRM5B3KS81 715 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms