RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 BCL2L15Q5TBC7 163 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 CGB2Q6NT52 195 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 HACD2Q6Y1H2 254 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 MOB3BQ86TA1 216 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 HAPLN4Q86UW8 402 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 LYPD6Q86Y78 171 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 SGPP2Q8IWX5 399 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 Q8IYB0 196 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 ZNF679Q8IYX0 411 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 ELMOD2Q8IZ81 293 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 OR8H3Q8N146 312 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 PARP16Q8N5Y8 322 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 Q8N6K4 173 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 BBS1Q8NFJ9 593 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 TEX47Q8TBZ9 253 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 TMEM163Q8TC26 289 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 MYOZ3Q8TDC0 251 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 HAVCR2Q8TDQ0 301 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 ARPC1AQ92747 370 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 RASL11BQ9BPW5 248 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 YIPF3Q9GZM5 350 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 ALX4Q9H161 411 aaPredicted RBP4.3□□□□□ -1.72
CDH13-211ENST00000568770 OR51J1Q9H342 316 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 GHITMQ9H3K2 345 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 RETNQ9HD89 108 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 EXOSC4Q9NPD3 245 aaKnown RBP4.3□□□□□ -1.72
CDH13-211ENST00000568770 PLSCR3Q9NRY6 295 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 FGFR1OP2Q9NVK5 253 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 PSG11Q9UQ72 335 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 VSIG4Q9Y279 399 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 GSTK1Q9Y2Q3 226 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 A3GALT2U3KPV4 340 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 KIAA1109Q2LD37 5005 aa4.3□□□□□ -1.72
CDH13-211ENST00000568770 MUC4Q99102 2169 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 IGHV1-3A0A0C4DH29 117 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 TRBV2A0A0J9YWF9 115 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 KBTBD11-OT1A0A1B0GTJ5 212 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 A0A1W2PPE3 182 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 LOC110117498-PIK3R3F6TDL0 507 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 G3V318 75 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 H3BN98 237 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 ARPC2O15144 300 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 MAGEB4O15481 346 aaPredicted RBP4.29□□□□□ -1.72
CDH13-211ENST00000568770 MPZL2O60487 215 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 E2F6O75461 281 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 GAPDHP04406 335 aaKnown RBP4.29□□□□□ -1.72
CDH13-211ENST00000568770 IGF1P05019 195 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 OR8U9P0C7N5 309 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 CGB3P0DN86 165 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 CGB7P0DN87 165 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 SLC2A5P22732 501 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 SOX6P35712 828 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 CCR9P51686 369 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 RIDAP52758 137 aaKnown RBP4.29□□□□□ -1.72
CDH13-211ENST00000568770 SCN1BQ07699 218 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 BNIP1Q12981 228 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 ATXN7L3Q14CW9 347 aaPredicted RBP4.29□□□□□ -1.72
CDH13-211ENST00000568770 LTC4SQ16873 150 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 MICAQ29983 383 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 ODF4Q2M2E3 257 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 SLC35D3Q5M8T2 416 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 PLEKHG7Q6ZR37 379 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 C9orf47Q6ZRZ4 202 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 SATL1Q86VE3 508 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 OR10X1Q8NGY0 326 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 OR2T10Q8NGZ9 312 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 BORCS8Q96FH0 119 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 COQ2Q96H96 371 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 S1PR3Q99500 378 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 NIPSNAP1Q9BPW8 284 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 FAM110AQ9BQ89 295 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 DGCR6LQ9BY27 220 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 PPIL3Q9H2H8 161 aaKnown RBP4.29□□□□□ -1.72
CDH13-211ENST00000568770 MOB1AQ9H8S9 216 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 PLEKHA1Q9HB21 404 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 HMG20AQ9NP66 347 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 OR52A1Q9UKL2 312 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 IKZF2Q9UKS7 526 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 COPS3Q9UNS2 423 aa4.29□□□□□ -1.72
CDH13-211ENST00000568770 PKHD1P08F94 4074 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 A0A087WW49 117 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 ZNF736B4DX44 427 aaPredicted RBP4.28□□□□□ -1.72
CDH13-211ENST00000568770 LINC01619G3V211 115 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 SLC33A1O00400 549 aaPredicted RBP4.28□□□□□ -1.72
CDH13-211ENST00000568770 HSPA12AO43301 675 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 GATBO75879 557 aaKnown RBP4.28□□□□□ -1.72
CDH13-211ENST00000568770 CYB5AP00167 134 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 MOSP00540 346 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 IGLV1-51P01701 117 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 ALPLP05186 524 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 CSN2P05814 226 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 OR5H8P0DN80 308 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 ZNF44P15621 663 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 CCL1P22362 96 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 CNTFRP26992 372 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 GLP1RP43220 463 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 KIR3DL2P43630 455 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 RBP2P50120 134 aa4.28□□□□□ -1.72
CDH13-211ENST00000568770 RAB9AP51151 201 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms