RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 UBE2E1P51965 193 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 SNU13P55769 128 aaKnown RBP10.99□□□□□ -0.65
CLK3-218ENST00000566926 MEF2CQ06413 473 aaPredicted RBP10.99□□□□□ -0.65
CLK3-218ENST00000566926 KIR2DS1Q14954 304 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 SLC9A3R2Q15599 337 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 RNASE10Q5GAN6 216 aaKnown RBP10.99□□□□□ -0.65
CLK3-218ENST00000566926 VAX1Q5SQQ9 334 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 TMEM200BQ69YZ2 307 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 PLET1Q6UQ28 207 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 Q6YL49 198 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 PRRT1Q99946 306 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 HEXA-AS1Q9H8Q6 139 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 HRASLSQ9HDD0 168 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 C19orf12Q9NSK7 152 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 ETAA1Q9NY74 926 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 IL36RNQ9UBH0 155 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 SCP2D1Q9UJQ7 156 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 POMT1Q9Y6A1 747 aa10.99□□□□□ -0.65
CLK3-218ENST00000566926 LINC00854A0A1B0GVQ3 168 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 FUOMA2VDF0 154 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 DISC1C4P0D8 188 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 RNASEK-C17orf49H0YIS7 233 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 RAB3DO95716 219 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 NAPSAO96009 420 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 FCGR3AP08637 254 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 FBP1P09467 338 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 COMPP49747 757 aaPredicted RBP10.98□□□□□ -0.65
CLK3-218ENST00000566926 EDDM3BP56851 147 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 ERVFRD-1P60508 538 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 FOXL1Q12952 345 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 TMEM17Q86X19 198 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 PDZD9Q8IXQ8 264 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 GAPTQ8N292 157 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 ARRDC1Q8N5I2 433 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 BEST4Q8NFU0 473 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 OR4K15Q8NH41 348 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 SSMEM1Q8WWF3 244 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 TNFRSF14Q92956 283 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 CREB3L1Q96BA8 519 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 DUX5Q96PT3 197 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 ZNF286AQ9HBT8 521 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 CHMP1AQ9HD42 196 aaPredicted RBP10.98□□□□□ -0.65
CLK3-218ENST00000566926 SLC2A8Q9NY64 477 aa10.98□□□□□ -0.65
CLK3-218ENST00000566926 MDFIC2A0A1B0GVS7 189 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 hADV38S2A0JD32 116 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 UBE2QL1A1L167 161 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 MEIS3P1A6NDR6 274 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 SIRPB1O00241 398 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 MGST3O14880 152 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 NPFFO15130 113 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 HOXA3O43365 443 aaPredicted RBP10.97□□□□□ -0.65
CLK3-218ENST00000566926 DIRAS3O95661 229 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 RBP4P02753 201 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 CD3DP04234 171 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 IFNA6P05013 189 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 CTXN2P0C2S0 81 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 HKR1P10072 659 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 DUSP1P28562 367 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 RFX2P48378 723 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 RAG2P55895 527 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 GRK1Q15835 563 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 MIDNQ504T8 468 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 CCBE1Q6UXH8 406 aaPredicted RBP10.97□□□□□ -0.65
CLK3-218ENST00000566926 Q6ZNX1 250 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 C17orf107Q6ZR85 190 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 ZNF554Q86TJ5 538 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 LDLRAD3Q86YD5 345 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 OR5AP2Q8NGF4 316 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 OR4C16Q8NGL9 310 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 OR5H2Q8NGV7 314 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 SLC25A21Q9BQT8 299 aaPredicted RBP10.97□□□□□ -0.65
CLK3-218ENST00000566926 ST6GALNAC5Q9BVH7 336 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 NCOR1P1Q9H4R4 102 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 MCUBQ9NWR8 336 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 ANXA10Q9UJ72 324 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 ELF5Q9UKW6 265 aaPredicted RBP10.97□□□□□ -0.65
CLK3-218ENST00000566926 NUBP2Q9Y5Y2 271 aa10.97□□□□□ -0.65
CLK3-218ENST00000566926 SOX21Q9Y651 276 aaPredicted RBP10.97□□□□□ -0.65
CLK3-218ENST00000566926 A0A0U1RQK1 487 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 TMEM82A0PJX8 343 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 TMEM30CPA0ZSE6 113 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 BTBD17A6NE02 478 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 C17orf98A8MV24 154 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 CRYBA1P05813 215 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 ZNF728P0DKX0 622 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 HLA-DMAP28067 261 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 ERP29P30040 261 aaKnown RBP10.96□□□□□ -0.65
CLK3-218ENST00000566926 ECI1P42126 302 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 OR3A3P47888 321 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 ARPC4P59998 168 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 RPL15P61313 204 aaKnown RBP10.96□□□□□ -0.65
CLK3-218ENST00000566926 KLRD1Q13241 179 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 RBMS2Q15434 407 aaKnown RBP10.96□□□□□ -0.65
CLK3-218ENST00000566926 PLA1AQ53H76 456 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 SLC35E4Q6ICL7 350 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 TRAT1Q6PIZ9 186 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 ZNF782Q6ZMW2 699 aaPredicted RBP10.96□□□□□ -0.65
CLK3-218ENST00000566926 ZNF497Q6ZNH5 498 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms