RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 GPR12P47775 334 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 GABPB1Q06547 395 aaPredicted RBP12.34□□□□□ -0.43
CDH3-204ENST00000565453 GPR50Q13585 617 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 IRF3Q14653 427 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 C1orf100Q5SVJ3 147 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 OR2W3Q7Z3T1 314 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 C5orf24Q7Z6I8 188 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 ZNF554Q86TJ5 538 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 PHYHIPQ92561 330 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 FAM46BQ96A09 425 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 RBMXL1Q96E39 390 aaKnown RBP12.34□□□□□ -0.43
CDH3-204ENST00000565453 VCXQ9H320 206 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 TAF9BQ9HBM6 251 aa12.34□□□□□ -0.43
CDH3-204ENST00000565453 NCBP2LA6PVI3 153 aaKnown RBP12.33□□□□□ -0.44
CDH3-204ENST00000565453 H0YHG0 523 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 TXNL1O43396 289 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 MOSP00540 346 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 UBBP0CG47 229 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 VSIG8P0DPA2 414 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 CHATP28329 748 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 THBS3P49746 956 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 GNMTQ14749 295 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 MORN2Q502X0 79 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 STEAP3Q658P3 488 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 OR10K2Q6IF99 312 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 FOXRED2Q8IWF2 684 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 MRPL41Q8IXM3 137 aaKnown RBP12.33□□□□□ -0.44
CDH3-204ENST00000565453 PRR18Q8N4B5 295 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 COMMD1Q8N668 190 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 S1PR3Q99500 378 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 TMED9Q9BVK6 235 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 CST11Q9H112 138 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 DCLRE1BQ9H816 532 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 ZFP57Q9NU63 452 aa12.33□□□□□ -0.44
CDH3-204ENST00000565453 PTGES3LE9PB15 166 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 AP4M1O00189 453 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 LANCL1O43813 399 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 MPIG6BO95866 241 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 KRTAP10-11P60412 298 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 QRFPP83859 136 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 SPHARQ15513 63 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 ODF3L1Q8IXM7 274 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 FAM71E2Q8N5Q1 922 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 OR8H1Q8NGG4 311 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 OR52L2PQ8NGH6 319 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 NRG4Q8WWG1 115 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 SULT4A1Q9BR01 284 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 TM2D1Q9BX74 207 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 OR2S2Q9NQN1 319 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 JPT1Q9UK76 154 aa12.32□□□□□ -0.44
CDH3-204ENST00000565453 DUS4LO95620 317 aaKnown RBP12.31□□□□□ -0.44
CDH3-204ENST00000565453 UCHL1P09936 223 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 SLC6A1P30531 599 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 F2RL1P55085 397 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 AQP4P55087 323 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 RPS27AP62979 156 aaKnown RBP12.31□□□□□ -0.44
CDH3-204ENST00000565453 SLC35B1P78383 322 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 HTD2P86397 168 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 CFHR3Q02985 330 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 UNC119Q13432 240 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 LSAMPQ13449 338 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 NKAPLQ5M9Q1 402 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 RBM48Q5RL73 367 aaKnown RBP12.31□□□□□ -0.44
CDH3-204ENST00000565453 LY6G6FQ5SQ64 297 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 GLT8D1Q68CQ7 371 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 C8orf86Q6ZUL3 223 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 OR51D1Q8NGF3 324 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 P2RX4Q99571 388 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 HSPB9Q9BQS6 159 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 KCNK15Q9H427 330 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 KCNIP1Q9NZI2 227 aa12.31□□□□□ -0.44
CDH3-204ENST00000565453 TMEM14DPA8MWL7 114 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 K7EIL1 84 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 SLC22A1O15245 554 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 YPEL1O60688 119 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 SRMP19623 302 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 HTR2CP28335 458 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 PPP1CCP36873 323 aaKnown RBP12.3□□□□□ -0.44
CDH3-204ENST00000565453 MYCNOSP40205 109 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 EGFEM1PQ0D2K5 195 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 HMGN3Q15651 99 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 PNLIPRP3Q17RR3 467 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 HSD17B12Q53GQ0 312 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 TEX38Q6PEX7 206 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 C6orf201Q7Z4U5 140 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 CEACAM19Q7Z692 300 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 RNF152Q8N8N0 203 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 KLHL30-AS1Q8NEE0 82 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 NEDD4LQ96PU5 975 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 YPEL2Q96QA6 119 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 GFI1Q99684 422 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 RASL11BQ9BPW5 248 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 NICN1Q9BSH3 213 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 FAAP24Q9BTP7 215 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 ABHD14AQ9BUJ0 271 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 TMEM59Q9BXS4 323 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 DUSP21Q9H596 190 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 SCN3BQ9NY72 215 aa12.3□□□□□ -0.44
CDH3-204ENST00000565453 A0A0A6YYD4 124 aa12.29□□□□□ -0.44
CDH3-204ENST00000565453 NUDT19A8MXV4 375 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms