RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 Q3ZCU0 254 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 OLFML2AQ68BL7 652 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 CCDC144NLQ6NUI1 221 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 SAMD12Q8N8I0 201 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 OR4P4Q8NGL7 312 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 RPEQ96AT9 228 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 BCL7BQ9BQE9 202 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 HDHD3Q9BSH5 251 aaPredicted RBP12.95□□□□□ -0.34
RAB40C-208ENST00000564703 Q9N2K0 584 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 COMMD3Q9UBI1 195 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 KCNK7Q9Y2U2 307 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 TRAV18A0A075B6X5 111 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 CCDC160A6NGH7 325 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 TRDCB7Z8K6 153 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 H3BUX3 64 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 HSPA12AO43301 675 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 ZNF182P17025 639 aaPredicted RBP12.94□□□□□ -0.34
RAB40C-208ENST00000564703 IL3RAP26951 378 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 BRS3P32247 399 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 MNDAP41218 407 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 GNG2P59768 71 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 ACTG1P63261 375 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 MADCAM1Q13477 382 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 HMGN3Q15651 99 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 UBE2NLQ5JXB2 153 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 HACD4Q5VWC8 232 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 STEAP3Q658P3 488 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 ZNF880Q6PDB4 577 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 OR10V1Q8NGI7 309 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 GCDHQ92947 438 aaPredicted RBP12.94□□□□□ -0.34
RAB40C-208ENST00000564703 AJUBAQ96IF1 538 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 CYYR1Q96J86 154 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 OCSTAMPQ9BR26 566 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 ABCG5Q9H222 651 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 JPT1Q9UK76 154 aa12.94□□□□□ -0.34
RAB40C-208ENST00000564703 A0A1W2PPE3 182 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 OOSP1A8MZH6 123 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 LPLP06858 475 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 ZBTB25P24278 435 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 KIR2DS4P43632 304 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 KIR2DS1Q14954 304 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 PNLIPRP3Q17RR3 467 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 KRTAP24-1Q3LI83 254 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 MORN2Q502X0 79 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 PLA1AQ53H76 456 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 C8orf31Q8N9H6 132 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 OR52L2PQ8NGH6 319 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 CMTM3Q96MX0 182 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 CHIAQ9BZP6 476 aa12.93□□□□□ -0.34
RAB40C-208ENST00000564703 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.93□□□□□ -0.34
RAB40C-208ENST00000564703 VGLL3A8MV65 326 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 YPEL1O60688 119 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 FCGR3AP08637 254 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 PAX6P26367 422 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 HLA-DRB3P79483 266 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 ZNF260Q3ZCT1 412 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 UTF1Q5T230 341 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 TPTE2P1Q5T6R2 138 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 DYNAPQ8N1N2 210 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 LINC00311Q8N616 119 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 TOMM40LQ969M1 308 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 SLC25A38Q96DW6 304 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 YPEL2Q96QA6 119 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 ST6GALNAC5Q9BVH7 336 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 C19orf24Q9BVV8 132 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 PITPNC1Q9UKF7 332 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 VPREB3Q9UKI3 123 aa12.92□□□□□ -0.34
RAB40C-208ENST00000564703 SVEP1Q4LDE5 3571 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 ATRQ13535 2644 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 FAM181BA6NEQ2 426 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 TMEM235A6NFC5 223 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 XRCC3O43542 346 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 GAPDHP04406 335 aaKnown RBP12.91□□□□□ -0.34
RAB40C-208ENST00000564703 SCTP09683 121 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 DTYMKP23919 212 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 PPP1CCP36873 323 aaKnown RBP12.91□□□□□ -0.34
RAB40C-208ENST00000564703 CEACAM6P40199 344 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 RAB7AP51149 207 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 RAB13P51153 203 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 RPL15P61313 204 aaKnown RBP12.91□□□□□ -0.34
RAB40C-208ENST00000564703 LY6EQ16553 131 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 SRSF7Q16629 238 aaKnown RBP eCLIP12.91□□□□□ -0.34
RAB40C-208ENST00000564703 LDLRAD2Q5SZI1 272 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 C5orf24Q7Z6I8 188 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 IZUMO1Q8IYV9 350 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.91□□□□□ -0.34
RAB40C-208ENST00000564703 OR4A4PQ8NGN8 299 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 RAB18Q9NP72 206 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 SLC23A1Q9UHI7 598 aa12.91□□□□□ -0.34
RAB40C-208ENST00000564703 ZNF230Q9UIE0 474 aaPredicted RBP12.91□□□□□ -0.34
RAB40C-208ENST00000564703 FAM25AB3EWG3 89 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 FAM25CB3EWG5 89 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 FAM25GB3EWG6 89 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 LY6LH3BQJ8 138 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 FABP7O15540 132 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 GPR137BO60478 399 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 APOA1P02647 267 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 DYNLT3P51808 116 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 SPCS2Q15005 226 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 CT45A1Q5HYN5 189 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms