RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 SLA2Q9H6Q3 261 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 RAB9BQ9NP90 201 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 ZNF355PQ9NSJ1 428 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 ARGLU1Q9NWB6 273 aaPredicted RBP5.57□□□□□ -1.52
VPS4A-203ENST00000564399 CNOT2Q9NZN8 540 aaKnown RBP5.57□□□□□ -1.52
VPS4A-203ENST00000564399 FRRS1LQ9P0K9 344 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 ZNF581Q9P0T4 197 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 WARS2Q9UGM6 360 aaKnown RBP5.57□□□□□ -1.52
VPS4A-203ENST00000564399 ST3GAL6Q9Y274 331 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 NUBP2Q9Y5Y2 271 aa5.57□□□□□ -1.52
VPS4A-203ENST00000564399 C13orf42A0A1B0GVH6 325 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 IZUMO1RA6ND01 250 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 B2RBV5 119 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 AIPO00170 330 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 MAGEB3O15480 346 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 SULT1B1O43704 296 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 DEDDO75618 318 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 ISG15P05161 165 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 HTR1AP08908 422 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 CRIP2P52943 208 aaPredicted RBP5.56□□□□□ -1.52
VPS4A-203ENST00000564399 KLF5Q13887 457 aaPredicted RBP5.56□□□□□ -1.52
VPS4A-203ENST00000564399 TATDN3Q17R31 274 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 C19orf54Q5BKX5 351 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 STEAP3Q658P3 488 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 ADGRG5Q8IZF4 528 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 ARHGAP24Q8N264 748 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 STX19Q8N4C7 294 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 DEFB125Q8N687 156 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 LFNGQ8NES3 379 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 NPBQ8NG41 125 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 OR5D14Q8NGL3 314 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 CANT1Q8WVQ1 401 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 CCDC124Q96CT7 223 aaKnown RBP5.56□□□□□ -1.52
VPS4A-203ENST00000564399 CPNE2Q96FN4 548 aaPredicted RBP5.56□□□□□ -1.52
VPS4A-203ENST00000564399 RDH12Q96NR8 316 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 NEURL2Q9BR09 285 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 FAM103A1Q9BTL3 118 aaKnown RBP5.56□□□□□ -1.52
VPS4A-203ENST00000564399 MRPL20Q9BYC9 149 aaKnown RBP5.56□□□□□ -1.52
VPS4A-203ENST00000564399 FBXL15Q9H469 300 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 SRD5A3Q9H8P0 318 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 SLC2A8Q9NY64 477 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 FAM53CQ9NYF3 392 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 TRAPPC2LQ9UL33 140 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 ING4Q9UNL4 249 aa5.56□□□□□ -1.52
VPS4A-203ENST00000564399 KLK5Q9Y337 293 aaPredicted RBP5.56□□□□□ -1.52
VPS4A-203ENST00000564399 A0A0G2JLM5 398 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 GABRPO00591 440 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 FCN1O00602 326 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 GEMIN2O14893 280 aaKnown RBP5.55□□□□□ -1.52
VPS4A-203ENST00000564399 MITFO75030 526 aaPredicted RBP5.55□□□□□ -1.52
VPS4A-203ENST00000564399 NDUFA3O95167 84 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 CDRT1O95170 752 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 HBZP02008 142 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 MT-ND4P03905 459 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 TFAP2AP05549 437 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 CSN3P07498 182 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 EGR2P11161 476 aaPredicted RBP5.55□□□□□ -1.52
VPS4A-203ENST00000564399 EPHA2P29317 976 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 DAPP51397 102 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 NANOS3P60323 173 aaKnown RBP5.55□□□□□ -1.52
VPS4A-203ENST00000564399 EFNB1P98172 346 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 ZNF85Q03923 595 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 TMEM30BQ3MIR4 351 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 AKIRIN2Q53H80 203 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 C6orf183Q5T699 404 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 SYT6Q5T7P8 510 aaPredicted RBP5.55□□□□□ -1.52
VPS4A-203ENST00000564399 CEMP1Q6PRD7 247 aaPredicted RBP5.55□□□□□ -1.52
VPS4A-203ENST00000564399 CD200R1LQ6Q8B3 271 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 IL34Q6ZMJ4 242 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 KCTD20Q7Z5Y7 419 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 SERPINA12Q8IW75 414 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 OR4K15Q8NH41 348 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 OR52N1Q8NH53 320 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 OR1L1Q8NH94 360 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 TMEM106AQ96A25 262 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 CLCC1Q96S66 551 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 WFDC10AQ9H1F0 79 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 OR2S2Q9NQN1 319 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 SIGLEC8Q9NYZ4 499 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 GAB2Q9UQC2 676 aa5.55□□□□□ -1.52
VPS4A-203ENST00000564399 DAPL1A0PJW8 107 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 OR4C45A6NMZ5 311 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 ZAR1LA6NP61 321 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 OR11H12B2RN74 326 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 J3QLW9 94 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 RRHO14718 337 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 GSTP1P09211 210 aaKnown RBP5.54□□□□□ -1.52
VPS4A-203ENST00000564399 CD7P09564 240 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 ZNF19P17023 458 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 RAB3AP20336 220 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 SERPINA2P20848 420 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 OR3A3P47888 321 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 CCR9P51686 369 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 RBM11P57052 281 aaKnown RBP5.54□□□□□ -1.52
VPS4A-203ENST00000564399 ALKBH1Q13686 389 aaKnown RBP5.54□□□□□ -1.52
VPS4A-203ENST00000564399 GUCA2BQ16661 112 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 RPEL1Q2QD12 228 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 MOGAT2Q3SYC2 334 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 MORN2Q502X0 79 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 C12orf73Q69YU5 71 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms