RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ERVFRD-1P60508 538 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 LCN2P80188 198 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 LOXL1Q08397 574 aaPredicted RBP10.56□□□□□ -0.72
CLK3-214ENST00000564096 Q3ZCU0 254 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 PLA1AQ53H76 456 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 LPCAT3Q6P1A2 487 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 DHRS11Q6UWP2 260 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 LHFPL1Q86WI0 220 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 SLC38A6Q8IZM9 456 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 ZDHHC22Q8N966 263 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 LY6G5BQ8NDX9 201 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 OR2AK2Q8NG84 335 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 RFESDQ8TAC1 157 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 TOMM40LQ969M1 308 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 Q96MF0 132 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 NUDT15Q9NV35 164 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 GFOD1Q9NXC2 390 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 RDH8Q9NYR8 311 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 C14orf166Q9Y224 244 aaKnown RBP10.56□□□□□ -0.72
CLK3-214ENST00000564096 OR2W1Q9Y3N9 320 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 SESN1Q9Y6P5 492 aa10.56□□□□□ -0.72
CLK3-214ENST00000564096 DCHS2Q6V1P9 2916 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 AKAP6Q13023 2319 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 C17orf98A8MV24 154 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 YPEL1O60688 119 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 TUSC2O75896 110 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 TCRBP04435 133 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 AADACP22760 399 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 OMGP23515 440 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 NFYBP25208 207 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 PPP1CCP36873 323 aaKnown RBP10.55□□□□□ -0.72
CLK3-214ENST00000564096 LUMP51884 338 aaPredicted RBP10.55□□□□□ -0.72
CLK3-214ENST00000564096 TAS2R31P59538 309 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 METTL11BQ5VVY1 283 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 ZNF660Q6AZW8 331 aaPredicted RBP10.55□□□□□ -0.72
CLK3-214ENST00000564096 C11orf88Q6PI97 169 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 CENPSQ8N2Z9 138 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 DUSP18Q8NEJ0 188 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 OR52L2PQ8NGH6 319 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 OR10V1Q8NGI7 309 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 ZFAND1Q8TCF1 268 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 YPEL2Q96QA6 119 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 ABHD14AQ9BUJ0 271 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 TOLLIPQ9H0E2 274 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 FXYD6Q9H0Q3 95 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 METTL8Q9H825 291 aaKnown RBP10.55□□□□□ -0.72
CLK3-214ENST00000564096 KCNS2Q9ULS6 477 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 POLR3KQ9Y2Y1 108 aaPredicted RBP10.55□□□□□ -0.72
CLK3-214ENST00000564096 KPTNQ9Y664 436 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 UTP20O75691 2785 aaKnown RBP10.55□□□□□ -0.72
CLK3-214ENST00000564096 FBN2P35556 2912 aa10.55□□□□□ -0.72
CLK3-214ENST00000564096 IGHV3-43A0A0B4J1X8 118 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 B4DSR2 109 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 ITGB1BP1O14713 200 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 ARPC1BO15143 372 aaKnown RBP10.54□□□□□ -0.72
CLK3-214ENST00000564096 SLC22A5O76082 557 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 RLN1P04808 185 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 MSMBP08118 114 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 IGHV1-8P0DP01 117 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 IGHV3-43DP0DP04 118 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 UCP3P55916 312 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 DLX6P56179 175 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 GNMTQ14749 295 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 ABCA11PQ4W5N1 156 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 LY6G6FQ5SQ64 297 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 CCBE1Q6UXH8 406 aaPredicted RBP10.54□□□□□ -0.72
CLK3-214ENST00000564096 CMTM1Q8IZ96 169 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 OR13C8Q8NGS7 320 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 UPRTQ96BW1 309 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 ZNF486Q96H40 463 aaPredicted RBP10.54□□□□□ -0.72
CLK3-214ENST00000564096 REG4Q9BYZ8 158 aa10.54□□□□□ -0.72
CLK3-214ENST00000564096 HECTD1Q9ULT8 2610 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 TRAV20A0A0B4J274 112 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 OR5H14A6NHG9 310 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 FAM157AC9JC47 383 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 RNF223E7ERA6 249 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 PEX14O75381 377 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 DHFRP00374 187 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 H2AFB2P0C5Z0 115 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 GATA3P23771 443 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 ZFP36P26651 326 aaKnown RBP10.53□□□□□ -0.72
CLK3-214ENST00000564096 IL3RAP26951 378 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 RAG2P55895 527 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 LOXL3P58215 753 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 MSMO1Q15800 293 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 AADACL3Q5VUY0 350 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 NCR3LG1Q68D85 454 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 C1orf122Q6ZSJ8 110 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 TMED4Q7Z7H5 227 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 LINC01356Q8N9X3 169 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 CCDC71LQ8N9Z2 235 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 OR13D1Q8NGV5 346 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 SECTM1Q8WVN6 248 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 TNFRSF14Q92956 283 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 SUCNR1Q9BXA5 334 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 TMPRSS13Q9BYE2 586 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 SLC5A7Q9GZV3 580 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 MMP28Q9H239 520 aa10.53□□□□□ -0.72
CLK3-214ENST00000564096 TMEM133Q9H2Q1 129 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms