RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 MTNR1BP49286 362 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 ZNF137PP52743 207 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 MTCP1P56278 107 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 NANOS3P60323 173 aaKnown RBP7.93□□□□□ -1.14
SF3B3-204ENST00000563739 TP53I3Q53FA7 332 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 CHST4Q8NCG5 386 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 HAVCR2Q8TDQ0 301 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 CASTOR1Q8WTX7 329 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 MRPL48Q96GC5 212 aaKnown RBP7.93□□□□□ -1.14
SF3B3-204ENST00000563739 OPALINQ96PE5 141 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 FAM110AQ9BQ89 295 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 SPATA25Q9BR10 227 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 ERVK13-1Q9NX77 482 aa7.93□□□□□ -1.14
SF3B3-204ENST00000563739 MEIKINA0A087WXM9 373 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 MOSP00540 346 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 MT-ND2P03891 347 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 GAPDHP04406 335 aaKnown RBP7.92□□□□□ -1.14
SF3B3-204ENST00000563739 LIMS3P0CW19 117 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 LIMS4P0CW20 117 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 CRHBPP24387 322 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 SOX6P35712 828 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 RAB9AP51151 201 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 ZNF134P52741 427 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 CRIP2P52943 208 aaPredicted RBP7.92□□□□□ -1.14
SF3B3-204ENST00000563739 SCN1BQ07699 218 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 GALEQ14376 348 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 IL34Q6ZMJ4 242 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 LHFPL3Q86UP9 236 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 SAXO1Q8IYX7 474 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 SYS1Q8N2H4 156 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 OR13C9Q8NGT0 318 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 FGGYQ96C11 551 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 C10orf35Q96D05 121 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 C4orf36Q96KX1 117 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 MYCBPQ99417 103 aaPredicted RBP7.92□□□□□ -1.14
SF3B3-204ENST00000563739 GON7Q9BXV9 100 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 PLCXD1Q9NUJ7 323 aa7.92□□□□□ -1.14
SF3B3-204ENST00000563739 CNOT2Q9NZN8 540 aaKnown RBP7.92□□□□□ -1.14
SF3B3-204ENST00000563739 DIMT1Q9UNQ2 313 aaKnown RBP7.92□□□□□ -1.14
SF3B3-204ENST00000563739 IGHV3-43A0A0B4J1X8 118 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 EFCAB10A6NFE3 127 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 LINC01619G3V211 115 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 J3QLW9 94 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 HSPA12AO43301 675 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 LGALS1P09382 135 aaKnown RBP7.91□□□□□ -1.14
SF3B3-204ENST00000563739 IGHV3-43DP0DP04 118 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 EGR2P11161 476 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-204ENST00000563739 ZNF19P17023 458 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 MYL12AP19105 171 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 DCKP27707 260 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 BLVRBP30043 206 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-204ENST00000563739 GABARAPL2P60520 117 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 LSAMPQ13449 338 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 PIGYQ3MUY2 71 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 ZNF773Q6PK81 442 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 SLC16A12Q6ZSM3 486 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 AHSA2Q719I0 299 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 KCTD20Q7Z5Y7 419 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 C8orf31Q8N9H6 132 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 CCDC54Q8NEL0 328 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 BPIFB6Q8NFQ5 453 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 OR10A7Q8NGE5 316 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 OR6Q1Q8NGQ2 317 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 OR10X1Q8NGY0 326 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 OR2G2Q8NGZ5 317 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 GGHQ92820 318 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 SPSB1Q96BD6 273 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 DGCR14Q96DF8 476 aaKnown RBP7.91□□□□□ -1.14
SF3B3-204ENST00000563739 PELI1Q96FA3 418 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 TMEM80Q96HE8 168 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 RBM38Q9H0Z9 239 aaKnown RBP7.91□□□□□ -1.14
SF3B3-204ENST00000563739 HIPK2Q9H2X6 1198 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 ISG20L2Q9H9L3 353 aaKnown RBP7.91□□□□□ -1.14
SF3B3-204ENST00000563739 FKBP14Q9NWM8 211 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 GFOD1Q9NXC2 390 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 GLS2Q9UI32 602 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 PSORS1C1Q9UIG5 152 aa7.91□□□□□ -1.14
SF3B3-204ENST00000563739 EXOSC1Q9Y3B2 195 aaKnown RBP7.91□□□□□ -1.14
SF3B3-204ENST00000563739 DEGS1O15121 323 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 HLA-DRB1P01911 266 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 HTR1AP08908 422 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 UBCP0CG48 685 aaKnown RBP7.9□□□□□ -1.14
SF3B3-204ENST00000563739 PRKACBP22694 351 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 ETV1P50549 477 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 ST3GAL4Q11206 333 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 MRPL28Q13084 256 aaKnown RBP7.9□□□□□ -1.14
SF3B3-204ENST00000563739 CNPY1Q3B7I2 92 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 PAN3Q58A45 887 aaKnown RBP7.9□□□□□ -1.14
SF3B3-204ENST00000563739 ELP2Q6IA86 826 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 FDX2Q6P4F2 183 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 C5orf24Q7Z6I8 188 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 OR8H1Q8NGG4 311 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 RASL11BQ9BPW5 248 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 OR51J1Q9H342 316 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 ZCCHC4Q9H5U6 513 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 FRRS1LQ9P0K9 344 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 BLOC1S6Q9UL45 172 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 CEPT1Q9Y6K0 416 aa7.9□□□□□ -1.14
SF3B3-204ENST00000563739 PKD1P98161 4303 aa7.89□□□□□ -1.15
SF3B3-204ENST00000563739 TRAV41A0A0B4J266 112 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms