RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 HSPA12AO43301 675 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 RGS11O94810 467 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 IFNA2P01563 188 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 RNF224P0DH78 156 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 CEACAM6P40199 344 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 EDDM3BP56851 147 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 C11orf71Q6IPW1 123 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 LPCAT3Q6P1A2 487 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 ZNF565Q8N9K5 539 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 OR52L2PQ8NGH6 319 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 RFESDQ8TAC1 157 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 ARL11Q969Q4 196 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 NAA60Q9H7X0 242 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 CBLN4Q9NTU7 201 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 SHPKQ9UHJ6 478 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 KIAA2026Q5HYC2 2103 aa15.01□□□□□ -0.01
COMMD4-208ENST00000563220 LYNX1G3V0Z9 82 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 HSD17B6O14756 317 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 TNFRSF13BO14836 293 aaPredicted RBP15□□□□□ -0.01
COMMD4-208ENST00000563220 DANCRP0C864 163 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 LYNX1P0DP58 116 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 COL8A2P25067 703 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 IL2RGP31785 369 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 CR1LQ2VPA4 569 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 SP6Q3SY56 376 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 FGFRL1Q8N441 504 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 COQ8AQ8NI60 647 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 CITED4Q96RK1 184 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 UBQLN2Q9UHD9 624 aa15□□□□□ -0.01
COMMD4-208ENST00000563220 GPR31O00270 319 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 EXOSC2Q13868 293 aaKnown RBP14.99□□□□□ -0.01
COMMD4-208ENST00000563220 OR10V1Q8NGI7 309 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 GALNT14Q96FL9 552 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 FAM234AQ9H0X4 552 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 RPS10-NUDT3A0A1W2PQS6 291 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 HMSDA8MTL9 139 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 TMPRSS2O15393 492 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 MPPED1O15442 326 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 ADAP1O75689 374 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 OR5AC1P0C628 307 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 GZMHP20718 246 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 SSTR2P30874 369 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 TMEM187Q14656 261 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 GNMTQ14749 295 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 OR8H3Q8N146 312 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 SEC22AQ96IW7 307 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 GPHA2Q96T91 129 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 DNTTIP1Q9H147 329 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 KCNIP3Q9Y2W7 256 aa14.99□□□□□ -0.01
COMMD4-208ENST00000563220 FCN3O75636 299 aa14.98□□□□□ -0.01
COMMD4-208ENST00000563220 CGB3P0DN86 165 aa14.98□□□□□ -0.01
COMMD4-208ENST00000563220 CGB7P0DN87 165 aa14.98□□□□□ -0.01
COMMD4-208ENST00000563220 LUMP51884 338 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-208ENST00000563220 RND3P61587 244 aa14.98□□□□□ -0.01
COMMD4-208ENST00000563220 SRSF4Q08170 494 aaKnown RBP14.98□□□□□ -0.01
COMMD4-208ENST00000563220 OPCMLQ14982 345 aa14.98□□□□□ -0.01
COMMD4-208ENST00000563220 HFEQ30201 348 aa14.98□□□□□ -0.01
COMMD4-208ENST00000563220 TRAT1Q6PIZ9 186 aa14.98□□□□□ -0.01
COMMD4-208ENST00000563220 CCDC71LQ8N9Z2 235 aa14.98□□□□□ -0.01
COMMD4-208ENST00000563220 TOLLIPQ9H0E2 274 aa14.98□□□□□ -0.01
COMMD4-208ENST00000563220 NCOR1P1Q9H4R4 102 aa14.98□□□□□ -0.01
COMMD4-208ENST00000563220 FAM25EA8MYX2 175 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 IGLV2-14P01704 120 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 LYPD2Q6UXB3 125 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 TBC1D26Q86UD7 250 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 DTX2Q86UW9 622 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 C14orf79Q96F83 325 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 IGHV3-43A0A0B4J1X8 118 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 NKX6-3A6NJ46 265 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 MPTX1A8MV57 137 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 SPINT2O43291 252 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 OR8U9P0C7N5 309 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 IGHV3-43DP0DP04 118 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 FAM185AQ8N0U4 392 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 OR8U1Q8NH10 309 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 GLYATL2Q8WU03 294 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 TP53RKQ96S44 253 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 RAB18Q9NP72 206 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 OR2S2Q9NQN1 319 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 OR6C3Q9NZP0 311 aa14.97□□□□□ -0.01
COMMD4-208ENST00000563220 HRNRQ86YZ3 2850 aaPredicted RBP14.96□□□□□ -0.01
COMMD4-208ENST00000563220 C13orf42A0A1B0GVH6 325 aa14.96□□□□□ -0.01
COMMD4-208ENST00000563220 A6NNC1 897 aa14.96□□□□□ -0.01
COMMD4-208ENST00000563220 TNFSF12O43508 249 aa14.96□□□□□ -0.01
COMMD4-208ENST00000563220 PGLYRP1O75594 196 aaPredicted RBP14.96□□□□□ -0.01
COMMD4-208ENST00000563220 CXCL2P19875 107 aa14.96□□□□□ -0.01
COMMD4-208ENST00000563220 PPP1CCP36873 323 aaKnown RBP14.96□□□□□ -0.01
COMMD4-208ENST00000563220 AP2S1P53680 142 aaPredicted RBP14.96□□□□□ -0.01
COMMD4-208ENST00000563220 HTD2P86397 168 aa14.96□□□□□ -0.01
COMMD4-208ENST00000563220 MEX3BQ6ZN04 569 aaKnown RBP14.96□□□□□ -0.01
COMMD4-208ENST00000563220 TCF23Q7RTU1 214 aa14.96□□□□□ -0.01
COMMD4-208ENST00000563220 BVESQ8NE79 360 aa14.96□□□□□ -0.01
COMMD4-208ENST00000563220 MSI2Q96DH6 328 aaKnown RBP14.96□□□□□ -0.01
COMMD4-208ENST00000563220 PDCD10Q9BUL8 212 aa14.96□□□□□ -0.01
COMMD4-208ENST00000563220 RAB1BQ9H0U4 201 aa14.96□□□□□ -0.01
COMMD4-208ENST00000563220 LAMP3Q9UQV4 416 aa14.96□□□□□ -0.01
COMMD4-208ENST00000563220 LRBAP50851 2863 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 ZNF462Q96JM2 2506 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 C3orf85A0A1B0GTC6 90 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 C5orf51A6NDU8 294 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms